Gene Dred_1617 details

Gene Information

• Locus tag: Dred_1617
• ID: 4957992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1757342
• End bp: 1757995
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640180793
• Product: TrkA domain-containing protein
• Protein accession: YP_001112970
• Protein GI: 134299474
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0569] K+ transport systems, NAD-binding component

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000138787
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAT TTGCCGTTAT TGGGTTAGGA CGTTTTGGTA GTAGTGTTGC CAGAACCCTT 
TCTAAAATGG ACTATGAGGT ACTGGGACTG GATGTAAATG AAGAACGTGT AAATGATATT 
ATAGAGGATG TAACCCATGC TGTTCAGTTG GATGCATTGG ATGACCATTC ATTACAGGCT 
GTAGGCATTC GTAATTTTGA CGTCGTGGTG GTGGGCATTG GTCAGGAGGT GCAATCCAGC 
ATATTGGTAA CTTTAATGTT AAAAGAAATG GGCGTCAAAA GGGTCGTGGC CAAGGCTCAA 
AATGATTTGC ACGGCAAGGT TCTTGAACGG GTGGGAGCTG ATAAAGTGGT CTTTCCAGAA 
AGAGATATGG GCATTAAGTT GGCCCATGCG TTGGTTTCCC AAAATATTAT GGAGCAGATA 
TCGTTGTCGC CGGAATATAG TCTGGTTGAA ATGGCAGCTC CGCCAAATTT TGTTAACAAA 
ACACTGGAAA AGTCCGGCGC CAGGCAACAA TATGGTGTCA GCATTCTAGC CATTCGAAGG 
GGGGAAGATA TGATCATCTC CCCGGGGGCC AGTCAAGAAA TTTTGGAAGG GGATATTTTG 
GTGGTCATTG GTAAGAATGA AAAACTACAA AAATTTGATA CGGTTGAGGT CTAA 

 

Protein sequence

MKQFAVIGLG RFGSSVARTL SKMDYEVLGL DVNEERVNDI IEDVTHAVQL DALDDHSLQA 
VGIRNFDVVV VGIGQEVQSS ILVTLMLKEM GVKRVVAKAQ NDLHGKVLER VGADKVVFPE 
RDMGIKLAHA LVSQNIMEQI SLSPEYSLVE MAAPPNFVNK TLEKSGARQQ YGVSILAIRR 
GEDMIISPGA SQEILEGDIL VVIGKNEKLQ KFDTVEV