Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1517 |
Symbol | |
ID | 4955905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1646442 |
End bp | 1646936 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180692 |
Product | TrkA domain-containing protein |
Protein accession | YP_001112872 |
Protein GI | 134299376 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGA TTAAAGAAAC TGATTTGCCG GGAATCGGTA GAAAATTCCA AGTAAATACC CGTAGTGGTG ACAAGTTGGT AATCGTTATT CATGATGATG GCCGACGAGA AATTCATCAT TTTGATTATG ATGATCCAGA AGAAAGCATC TCAATGGTGA CACTGGATGA TAATGAGGCC CGCCGCGTAA GTGGTATTAT TGGTGGTATG GCCTATCTGC CTAAGGCATT GGAATCCGTG GAAGTGGCCT TTGATAATAT GGTATTTGAA TGGTATAAGG TAGAGAGTGG CGCGAAAGCC ATTGGTAAAA CCATCGTAGA ACTGCAAATA CGCAAAAAAA CCGGGGCCAT GATTATTGCA ATTATTAAAA AGGATGAGAA AATAATTAAT CCAGGTCCCA ATCAAGTAAT TGCGGAAGGG GCTACGCTAG TGGTCATCGG TGAAAGAAAA CAAGTGAAGG CCTGTAAAGA ACTACTCTTA AATGGGAGCC TATAG
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Protein sequence | MSLIKETDLP GIGRKFQVNT RSGDKLVIVI HDDGRREIHH FDYDDPEESI SMVTLDDNEA RRVSGIIGGM AYLPKALESV EVAFDNMVFE WYKVESGAKA IGKTIVELQI RKKTGAMIIA IIKKDEKIIN PGPNQVIAEG ATLVVIGERK QVKACKELLL NGSL
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