Gene Dred_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1262 
Symbol 
ID4956998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1341089 
End bp1341757 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content38% 
IMG OID640180436 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_001112621 
Protein GI134299125 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.247212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCC TAAACTATGA ACCCTTGGCC TTAGAAGAAG AGGAGAAAAA TCTTATTAGA 
GAGTATGGGA CAGTAGTCAA CTACCCGAAG GGACAAATCA TATTTGCAGC GGGTGATACT
GCAGATCGTA TTTATTTGAT TGAAGAAGGA TTTGTAAAAA TATACCGGAT AACTGCAGAT
GGACGACGTG TTACAGTTGG TAGTATGAGA AGTCCCGGAG AATTAATGGG CTTGGCAGAG
ACCTTATATC ACGGAGAAAG AACATGTTTT GCTGGTGCGA TAAATGATGC AACTTTAGTG
GTTGTAAGAA AGAACAGATT TGAAGAGTTA TTAGAACAAC ATCCTGCCAT TGCTATAAAG
GTTGCTAAAA CCCTAGGCGT ACGAATGAGG GAAGCAGAGG CAATTATTCA TGAAATGGTT
TGCTGGCAAG TGCCGGGAAG GTTAGCTATG CTTCTATTAA AAATGTCTGA ACGAGCAGGT
GTTGAAACAG AATTAGGTAC TAAAATAGAC TTAAGACTTA CACATGAAGA AATTGCCTGT
ATGATTGGTA CATCTAGACA GACAGTAACA TCTCTGTTAA ATACCTTTAA ACAAGAAAAA
AGCATTGTCA TTGAAGGCAG AGAAATGTAT GTAGTAGATA CTGAGAAACT TAATAAGTGG
ATAGTATAA
 
Protein sequence
METLNYEPLA LEEEEKNLIR EYGTVVNYPK GQIIFAAGDT ADRIYLIEEG FVKIYRITAD 
GRRVTVGSMR SPGELMGLAE TLYHGERTCF AGAINDATLV VVRKNRFEEL LEQHPAIAIK
VAKTLGVRMR EAEAIIHEMV CWQVPGRLAM LLLKMSERAG VETELGTKID LRLTHEEIAC
MIGTSRQTVT SLLNTFKQEK SIVIEGREMY VVDTEKLNKW IV