| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1228 |
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| Symbol | |
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| ID | 4956971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1304028 |
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| End bp | 1305344 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640180398 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001112587 |
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| Protein GI | 134299091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000450762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCGT GTTTAGACCC GGGGCATGGC TACAACACAG CCGGTAAGCG TAGCCCCGAT
GGATCACTGC TGGAGTATGA ATTCAATCAG GCGGTTGCCG ATATTGCCGA GAGAATGCTT
CGGCAGCGCG GTAAAGATGT AGTTCTAACA AAGAAAAAAG GCGATCCTGA TGTTCCCCTG
GGTACCAGGT GCAAGATTGC CAATAACGAA AAGGCCAAAT GCTTTATTAG CATCCACGCT
AACGCCCATT TAAACACCTG GAGCAATGCC GGGGGTTTCG AGGTATATCA CTTCCCCGGA
AGCAATACCG GAAGAAAACT AGCCGAGATT GCTCACAAGC ATCTGCGGCA AAAACTAAAA
ATCAGAGATC GGGGCATAAA GCAGGCCAAC TTTGCAGTGC TCAGGGAAAC AAACATGCCT
GCCATTCTGA TTGAGTTTGC TTTTTTCACT AATCAAGAGG AATGCGCCTT ACTCAAAACC
GATGCTTTTA GGGAAGCCTG CGCTGAGGTT GTTGTTCTAA CTGAGATTGA GTATACTGGA
GACCCCGGAA AGGCTGCAGC TCCAGTGAGC AATGGAAACA AAATGCCTAT CATTGGCAAG
CAATACCTTA CTGCCGGACA GCTGGACGCT TATGTGCGTT CCAAAAATCC AAATGCTCCC
GACTTGGTTG ACTACTATCT TAAGCTGGGA GATGAAATGG GAATTCGAGG TGATATAGCC
TTTTGTCAGA GCTGCAAGGA GACGAAGTTT TTTAAGTTTG GCGGAGATGT GCTGCCAGAA
CAAAACAACT TTGCCGGGAT CGGCACCACC GGTGGCGGCG TAAGAGGAGC ATACTTCGAT
ACCCCCAGGC AGGGCATACT TGCCCAATTG CAGCACCTTT GGGCTTATGC AACTAAAGAC
CCCTTGCCTG CTGGTATGGA GGTTATTGAC CCCAGGTTTG ACTTGGTAAG CAGGGGTTCT
GCACCATGCT GGGAGGATCT AAGCGGTAAG TGGGCCACCG ACCCTGGCTA TGGCCGTTCA
ATAATCCATG ATTTTTATGC CGAGGCGAAG TCCTTCCCTG ATACGTCCAG GGTACCCAAG
GAGGACGGTG CGGAGATTGA AGAACCCGGC CCCTCACCTC AGCCACTACC GGAAGTCAAA
AAGGCGGAGA AAAAACAGAA GGTCCTCCAT ACTGCAGCTA TTATCGAAGG ACAGGCGCTG
CCTGCTGTGG TAATTGAAGG TAAGGGGTAC GTTGGTGTGA GTGATATTGA GAACTATCTA
GACCTAAACG CTCTGTGGGA CAAGAAGAAT AGCGTGATTA TGTTTTTGAG GAGGTAG
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| Protein sequence | MTSCLDPGHG YNTAGKRSPD GSLLEYEFNQ AVADIAERML RQRGKDVVLT KKKGDPDVPL
GTRCKIANNE KAKCFISIHA NAHLNTWSNA GGFEVYHFPG SNTGRKLAEI AHKHLRQKLK
IRDRGIKQAN FAVLRETNMP AILIEFAFFT NQEECALLKT DAFREACAEV VVLTEIEYTG
DPGKAAAPVS NGNKMPIIGK QYLTAGQLDA YVRSKNPNAP DLVDYYLKLG DEMGIRGDIA
FCQSCKETKF FKFGGDVLPE QNNFAGIGTT GGGVRGAYFD TPRQGILAQL QHLWAYATKD
PLPAGMEVID PRFDLVSRGS APCWEDLSGK WATDPGYGRS IIHDFYAEAK SFPDTSRVPK
EDGAEIEEPG PSPQPLPEVK KAEKKQKVLH TAAIIEGQAL PAVVIEGKGY VGVSDIENYL
DLNALWDKKN SVIMFLRR
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