| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1215 |
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| Symbol | |
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| ID | 4955580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1290527 |
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| End bp | 1293619 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640180385 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_001112574 |
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| Protein GI | 134299078 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5280] Phage-related minor tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATA GGTTATATGA AATGGCTATT CAATTAGCCG GACACGTCAG CTCATCGTTA
CCACGGGCAT TCAGGTCAAC AAGTGACCAC ATGCAAAACC TTAACCAGCA GACGAATACT
GCACGTACAG CATTAAGGAA CTTGGAGCGG GTCCAGAACG ATGTCGCCAG AAGTCGTCAG
CTGCAGGAAC AGGTTGCTCA AACGAGCCAG GAGTTCCAAG AAGCTAGGGA AAGAGTTAAC
CGCCTGGCAG CAGAACTCAT TCGCACAGAG AACCCCACGC GGGAGTTGCA GCAACGTTTT
CGGCAGGCTG AAAGTGAAGC TAATAGATTA AACACCAGGC TTACCGCTCA GCGTTCTGAT
CTCCAAAGGC TGCAGGCCGC TTTACGTGAG GCCGGAGCTG ATACTCGTAA CCTGGACCAG
GAATACCGGG ATTTAACACA ACAACTACAA AGAGCTGAAC AGGCGCAGCG CAGTTTTAAC
CGGGCTGTCC AGGCAAACGA ACGTAATCAA GAAATAAGGG AAAAATCGCA GGGTGCAGTA
ATGACAGCGG CGGCAGCAGC CACTCCAATA GTAGGGGCTA CTGTAGCCGC TAATAATTAC
GTAGAGGCTC AGCGTAATAT TCAAATTCAG TCTAATCTAA CAGCAAAACA AGTCAGCACA
GCTTGGGAGG TTGTGCGCCA GGCGCATCTA TCCGGCTTGG GTGGAGGTAT TCAAGAGACA
GCCAATGCCT ATGGTCAGAT GTCACAGATA ATTAAAAATG AATCCGCAGA CCAGCAAAAA
ACTGCATTAC AGACTGCCCT AGCCATTGAA AAATATTGGG GTGAAGCTCC GGATAGTATG
GCAAAAGCAG TCCATAACTT GACATCAAAC TTTAAAGGGC TATCCAGCAC CGGGGCAATG
GATATAGTAG CGGCTGGTTT TAAGAACGGC CTGAACTATG CTAATGACTA CCTTGATACT
CTTTACGAAT ACAGCCCGCA GTTTGAATCT ATCGGCTATA ACGCCAAGCA GTTTTATTCC
GTCTTGGCAG CAGGTAAAAA CGCCGGCGCT TTTAACTTGG ACAAGGTTGC AGATGCTGTG
AAGGAATTTA ATATTAGGGC TAAAGACGGC AGTAAAACAA CGGCAGACGG GTTTGCAATG
ATTGGCCTTG ATGCGGGTAA GATGGCAAGT GAAATTGCAG TCGGCGGTAA GCGGGGAGTT
GCAGCCCTCG ACCAAACTAT TAAGGCATTG CGTAACGTCC AGGACCCAGT TAAACGAAAT
CAGGCAGGGG TGGCCCTTTT CGGTACCCAG TGGGAGGATC TCACCGAGAA GGTAATTCTG
AGCATGAATG TTATGGATCA AGCCGGTAAT AGCATAGATG GCACAGCTAA AAAGGTTGTG
GATGCTGCTA CGAAAGCTGG TGAAGGGGGT CCCACCTGGA CGCAACTTGG ACGACAGGTG
TATGACGCTG CTGCAAAAAT GGGTAATGCC TTGCTGCCGG TAGTAACGCC GCTTGCTAAT
AAGCTAACCA GCCTAACTAA AAACGTTTCA GCCTTTATTG AGAAGAACCC CGAGCTGTCG
AGAGTATTAA TGGTTGGTGC TGCGGGTGCT GTAGGATTAG GTCTAGCGGT GGCCGGGTTA
ACCTTTGTCA TAAGTTCTGC TATAAACCCA TTTTTAAGCT TTTACGCCTG GTCTAAAAAG
ATTGAGTTAG GTAATAAGTT AGCTGCAGGT GCTACAAAGG CTTGGACTGC TGCACAATGG
CTATGGAACG CAGCAATGAC GGCAGGTAGG GCTTTGCTTT CTGCAGGTAG ATTGATAGCT
TATTATGCAA TAATGGGTAC TATATTCGGT GCTACAAAGG CTTGGACTGC TGCACAATGG
CTATGGAACG CAGCAATGAC GGCAGGTAGG GCTTTGCTTT CTGCAGGTAG ATTGATAGCT
TATTATGCAA TAATGGGTAC TATATTCGGT GCTACAAAGG CTTGGACTGC TGCACAGTGG
CTTTTAAATG TGGCCCTAAA CGCTAACCCT ATAGGCTTGG TGATCGGTCT TATTGCGGGG
CTTGTTGCGG CTGGCGTGCT ACTTTATAAG AACTGGGATA CTGTTAAGGC CAAGGCCGGA
GAACTATGGA ATGGCATCGA AACGGCTTTT AAACGAGGTG TTAACGGCGC GATAGGTTGG
GTTAACGCTT TAATAGATAA AGTTAATAAA ATTCCTGGCA TCAATATTCA AAAAATCGGA
CTGGTATCTA CTGCCGGTAG TGGCTCTGCC AATGTCGCCA ACCTGCACAA ATATGCAGCC
GGTGGCTTTG CAGACCGGCC CTCGATATTC GGTGAAGCCG GGCCAGAAGC GGCCATACCT
CTAAAGAAAA CAAAGAGATC TTATGAGCTT TGGGAAAAGA CGGGTAAATT GTTGGGTATA
TTGCCGGTTA AAGAAAGCAC TAAGGTTAAT CAAAAAACTT CTTTAATCAC GAAAATAGCA
AAGGTCGCCA ACCTGCACAA ATATGCAGCC GGTGGCTTTG CTAACCGGCC CTCGATATTC
GGTGAAGCCG GGCCAGAAGC GGCCATTCCT CTTAAGAAAA CAAAGAGGTC TTATGAGCTT
TGGGAAAAGA CCGGTCGACT TCTGGGTATT TTGCCGGTTA AAAAGAGCAC TGAGGTTAAT
CAAAAAACTT CTTTAATCAC CAAAATGGCA AAGGTCGCCA ACCTGCACAA ATATGCAGCC
GGTGGCTTTG CTAACCGGCC CTCGATATTC GGTGAAGCCG GGCCAGAAGC GGCCATTCCT
CTTGCTAGAT CTGCTCGCAG TTTGTCCTTG TGGCAGCGAG TTGGGCAGGT ATTAGGCATC
CACACACTTG TGTCTGGGTC CGGGTCTGAG CCTGGGTTTA AAAGGTTTAA CATATCAAAT
GCGTTGAAAC AGTTATCCCA GAATGATAAT AGCAGCAGCA TGGTGATTAA TGTTAATCCG
ACTTTTGCGC CGGTTATAAA TGGCTCCGGG GATAATGTGA AAGAAACTCT GCAAGAACAG
CAGGACAGCT TTATGGATAA GCTAGAAAGG CTGATTGAGG ATAAAGTAAA TGCCATGCAG
CGGCAGAAAA GGCGGGTTGC TTATGCCGAC TAG
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| Protein sequence | MANRLYEMAI QLAGHVSSSL PRAFRSTSDH MQNLNQQTNT ARTALRNLER VQNDVARSRQ
LQEQVAQTSQ EFQEARERVN RLAAELIRTE NPTRELQQRF RQAESEANRL NTRLTAQRSD
LQRLQAALRE AGADTRNLDQ EYRDLTQQLQ RAEQAQRSFN RAVQANERNQ EIREKSQGAV
MTAAAAATPI VGATVAANNY VEAQRNIQIQ SNLTAKQVST AWEVVRQAHL SGLGGGIQET
ANAYGQMSQI IKNESADQQK TALQTALAIE KYWGEAPDSM AKAVHNLTSN FKGLSSTGAM
DIVAAGFKNG LNYANDYLDT LYEYSPQFES IGYNAKQFYS VLAAGKNAGA FNLDKVADAV
KEFNIRAKDG SKTTADGFAM IGLDAGKMAS EIAVGGKRGV AALDQTIKAL RNVQDPVKRN
QAGVALFGTQ WEDLTEKVIL SMNVMDQAGN SIDGTAKKVV DAATKAGEGG PTWTQLGRQV
YDAAAKMGNA LLPVVTPLAN KLTSLTKNVS AFIEKNPELS RVLMVGAAGA VGLGLAVAGL
TFVISSAINP FLSFYAWSKK IELGNKLAAG ATKAWTAAQW LWNAAMTAGR ALLSAGRLIA
YYAIMGTIFG ATKAWTAAQW LWNAAMTAGR ALLSAGRLIA YYAIMGTIFG ATKAWTAAQW
LLNVALNANP IGLVIGLIAG LVAAGVLLYK NWDTVKAKAG ELWNGIETAF KRGVNGAIGW
VNALIDKVNK IPGINIQKIG LVSTAGSGSA NVANLHKYAA GGFADRPSIF GEAGPEAAIP
LKKTKRSYEL WEKTGKLLGI LPVKESTKVN QKTSLITKIA KVANLHKYAA GGFANRPSIF
GEAGPEAAIP LKKTKRSYEL WEKTGRLLGI LPVKKSTEVN QKTSLITKMA KVANLHKYAA
GGFANRPSIF GEAGPEAAIP LARSARSLSL WQRVGQVLGI HTLVSGSGSE PGFKRFNISN
ALKQLSQNDN SSSMVINVNP TFAPVINGSG DNVKETLQEQ QDSFMDKLER LIEDKVNAMQ
RQKRRVAYAD
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