Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1198 |
Symbol | |
ID | 4956957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1275423 |
End bp | 1276787 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640180368 |
Product | SNF2-related protein |
Protein accession | YP_001112557 |
Protein GI | 134299061 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000524568 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTTA AGCCACATGA ATATCAGGGT TATGCAATTA AGAAAATCAT AGAGCTGCCG GCAGTTGGAC TTTTCATGGA TATGGGTCTT GGGAAGACAG CCTGCGCCCT AACTGCAACC GCAGAGCTAA TGCATAACTA CTTTGAGGTT TCAAAGGTTT TAGTTGTAGC ACCGCTGAGG GTGGCGGAGG ACACCTGGAG CCGTGAAACC GCGAAGTGGG ACCACTTGAA TTATTTAAGA ATTGCTAAGG TGCTAGGTCC TGAAAAAGAT CGCATAGCGG CTCTTAATTC CAAAGCTGAT ATTTATGTGA TAAACCGCGA GAATGTTAAA TGGCTGGTTG AGCACTTCGG TAAAAAATGG CCCTTCGATA TGGTGATTAT AGACGAGCTT TCAAGTTTCA AATCATCTAA GGCTAAAAGG TTCAGGGCGC TGCGAAAAGT AAGGCCGCTA ATAAAAAGAA TCATCGGGTT GACAGGAACG CCGGCACCGA ACGGACTGCT TGACTTATGG CCGCAGGTTT ATCTGTTGGA CCTCGGGGAG CGCCTGGGAA AGACAATCAC CGGATATCGG GAAAGATATT TTAAACCGGG TAAAAGAAAC CGGTCAGTTA TATTCACCTG GGACCCAAAG CCGGACGCTG AAGCGGCTAT ACACAACAAG CTTTCAGACC TTTGCGTGAG CATGAGCGCA GCGGATTGGC TGCAGCTGCC AGAACGAATC GATAATATCA TCCCGGTTAA TTTATCACTT AAAGCCTGGG GCCAATATGA ACAGCTAGAA CGGGATCTGC TGTTACCTTT AGCTGACGGG GATGTGGTTG CCAATACCGC AGCAGTGCTG GCTAATAAGC TGCTGCAAAT GGCAAACGGG GCCGTATACG ATGAGAACGG AATGGCCCAG GAATTCCACA AGGCTAAGCT GGAGGCTTTA GAAGGGGTTA TCGAGGAGGC CGCAGGGAAA CCGGTGCTAG TGTTTTACTC TTACCGACAC GACCTGGATC GGATTAAAGA ACACTTTAAG CAATACAAAC CTAAAGAATT AAAGACCGCA GAGGATATAA AGAATTGGAA CGACGGAAAG GTTCAGATCA TGTTAGCGCA TCCAGCTTCA GCCGGCCACG GATTGAACCT TCAAGCAGGC GGTAATATAA TAGCTTGGTT TTCCACACCG TGGAGCCTGG AGCTGTACCA GCAGGCCAAC GCAAGGCTAC ACCGGCAGGG GCAGCAAAGG GCGGTTATTA TTCATCACCT GGTAGCCAAG GGAACTATTG ACGAGGACGT GATTAGAGTC CTTGGGTATA AAGAACGAGG GCAAAACGCC CTACTGGAAG CGGTTAAAGC TAGAATAGCT GCAATCGCGA CTTAA
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Protein sequence | MIFKPHEYQG YAIKKIIELP AVGLFMDMGL GKTACALTAT AELMHNYFEV SKVLVVAPLR VAEDTWSRET AKWDHLNYLR IAKVLGPEKD RIAALNSKAD IYVINRENVK WLVEHFGKKW PFDMVIIDEL SSFKSSKAKR FRALRKVRPL IKRIIGLTGT PAPNGLLDLW PQVYLLDLGE RLGKTITGYR ERYFKPGKRN RSVIFTWDPK PDAEAAIHNK LSDLCVSMSA ADWLQLPERI DNIIPVNLSL KAWGQYEQLE RDLLLPLADG DVVANTAAVL ANKLLQMANG AVYDENGMAQ EFHKAKLEAL EGVIEEAAGK PVLVFYSYRH DLDRIKEHFK QYKPKELKTA EDIKNWNDGK VQIMLAHPAS AGHGLNLQAG GNIIAWFSTP WSLELYQQAN ARLHRQGQQR AVIIHHLVAK GTIDEDVIRV LGYKERGQNA LLEAVKARIA AIAT
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