Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1129 |
Symbol | |
ID | 4955243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1200100 |
End bp | 1200780 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640180298 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001112488 |
Protein GI | 134298992 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTATGA ACGCAAAAGA GCTGGCAAAA ATGATTGACC ATACAGTACT GAAAGCCGTT GCCAGTAAGA AAGATATTGT AATGCTTTGT CAGGAAGCAA AGGAATATGG TTTTGCCTCT GTCTGTATAA ACCCATTTTT TGTACCTCTG GCAGTAGAAC AACTAAAAGA CAGTGAAGTT GTAGTCTGCA CTGTGATTGG TTTCCCTCTG GGTAGCACCA CCACTGCTTC CAAAGTAGCT GAGACGGTTG AGGCAGTTCA AAATGGGGCG AAGGAAGTGG ATATGGTCAT CAACGTAGGC GCTCTAAAGG ACGGCCAGAC GGAAGTCGTT TTCAATGATA TGAAGGCTGT GGTAGAAGCG GCCCAGAGTG TTAATCCTGA GGCCATTACC AAAGTTATCA TTGAGACTTG CTACCTAACC AAGGAGGAAA AAATCCAAGC CTGTGAACTA GCCAAGAAAG CCGGTGCGCA TTTTGTGAAA ACCAGTACTG GCTTTGGGTC CGGTGGTGCT ACCACAGAGG ATGTTGCCTT GATGCGGCAA ATTGTTGGCC CCAATCTGGG TGTGAAGGCT TCTGGAGGCA TCAAGAATGC TCGAGATGCC TTGGCTATGA TGCAAGCTGG AGCCAGTCGG ATCGGTGCCA GTGCAGGTGT TGCTATTGTC CAAGAACTAA AGGGTATATA A
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Protein sequence | MSMNAKELAK MIDHTVLKAV ASKKDIVMLC QEAKEYGFAS VCINPFFVPL AVEQLKDSEV VVCTVIGFPL GSTTTASKVA ETVEAVQNGA KEVDMVINVG ALKDGQTEVV FNDMKAVVEA AQSVNPEAIT KVIIETCYLT KEEKIQACEL AKKAGAHFVK TSTGFGSGGA TTEDVALMRQ IVGPNLGVKA SGGIKNARDA LAMMQAGASR IGASAGVAIV QELKGI
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