Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1071 |
Symbol | |
ID | 4955982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1142149 |
End bp | 1143555 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640180241 |
Product | putative oxidoreductase |
Protein accession | YP_001112431 |
Protein GI | 134298935 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.188657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAC AAATTATCCC TAAAAAGCAC CCCATGCCCC ACCAAGATCC TAAGGTAAGG GCTAAGAACT TTGATGAAGT GGCACTGGGC TATACAGAAG AATTAGCTTT GGCAGAAGCT GAACGCTGCC TTAAATGCAA AAATCCGATG TGTATGAAAG GTTGTCCCGT TAGTGTAGAT ATTCCTGAAT TTATCGCCCA TGTCAAGGAA CGTAAATATG AGGAAGCAGC TAAGGTTATC AAACGTACCA ACGCTCTGCC GGCTGTATGT GGACGGGTAT GCCCCCAGGA GAACCAGTGC GAGAAATTCT GTATTGTTGG TAAAAAGAAT GAGCCAGTGG CCATCGGTCG TTTAGAGCGC TTTGTCGGTG ATTATATGGT TAACAAAGAA GCTGAGATTG AAAAGGCGGA AGCTACCGGC TATAAAGTGG CCATCGTTGG CTCTGGGCCC GCAGGTTTAG CCTGTGCTGC GGATTTGGCA CGATTAGGCC ACAGTGTTAC CATGTTTGAG GCATTGCATA CCCCCGGTGG TGTGTTGATG TATGGTATTC CGGAATTCCG GTTACCCAAG GCTATTGTGC AGAAGGAAAT CCAAAATTTA AAGAAAATGG GCGTTGAAAT TGAAACAAAC GCCATTGTCG GTCAAATTGC TTCCCTGGAT GAATTGTTGC AGGAAGAAGG TTTTGATGCT GTATTCCTGG GCACAGGTGC AGGTACACCC TACTTTATGA ACCTGCCAGG GGAAAACTAT AACGGGGTTT ATTCAGCCAA TGAATTTTTA ACCCGTTCCA ATTTAATGAA AGCCTATTGC TTCCCCCAGT GTGATACACC TATTAAGGTA GGTAAGAAGG TAGCAGTTTT AGGCGGTGGC AATGTTGCCA TGGATGCAGC CCGTACAGCT CTTCGGTTGG GTGCAGAGGA TGTCTATATT GTTTATCGTC GCTCCCGGGC AGAACTACCA GCCCGACTAG AGGAAGTTGA ACATGCTGAG GAGGAAGGCG TCCAATTCCT ATTCTTAACC AACCCAACCA AATATGTTGG AAGTGAAGAA GGCTGGTTAA CTGGTTTACA ATGTATAAAA ATGGAATTGG GCGAGCCCGA TGCCTCCGGA CGCCGGAAAC CCGTTCCAAT TGATGGGAGC GAATTTGTTC TACCGGTGGA TGTGGCCATT GTAGCCATCG GTCAAGGACC GAATCCGCTA CTGACCAAGA CTACTCCTGA TTTGGAAACT AACAAGCGGG GTAATATTAC GGCCGATGAA ACGGGAAAAA CCTCTAAAGA GGGGGTTTAT GCCGGTGGAG ACGTTGTAAC CGGTGCAGCC ACAGTCATTA AGGCCATGGG AGCAGGTCGC GTTGCAGCCA CTAGTATTCA TGAGTACTTA ATGGGCAAAG GACCTAAGAA AAACTAG
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Protein sequence | MAKQIIPKKH PMPHQDPKVR AKNFDEVALG YTEELALAEA ERCLKCKNPM CMKGCPVSVD IPEFIAHVKE RKYEEAAKVI KRTNALPAVC GRVCPQENQC EKFCIVGKKN EPVAIGRLER FVGDYMVNKE AEIEKAEATG YKVAIVGSGP AGLACAADLA RLGHSVTMFE ALHTPGGVLM YGIPEFRLPK AIVQKEIQNL KKMGVEIETN AIVGQIASLD ELLQEEGFDA VFLGTGAGTP YFMNLPGENY NGVYSANEFL TRSNLMKAYC FPQCDTPIKV GKKVAVLGGG NVAMDAARTA LRLGAEDVYI VYRRSRAELP ARLEEVEHAE EEGVQFLFLT NPTKYVGSEE GWLTGLQCIK MELGEPDASG RRKPVPIDGS EFVLPVDVAI VAIGQGPNPL LTKTTPDLET NKRGNITADE TGKTSKEGVY AGGDVVTGAA TVIKAMGAGR VAATSIHEYL MGKGPKKN
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