Gene Dred_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1055 
Symbol 
ID4955585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1128754 
End bp1130379 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content40% 
IMG OID640180225 
Productcopper amine oxidase domain-containing protein 
Protein accessionYP_001112415 
Protein GI134298919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000877953 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAT TTATTGTTTT ATTGTTATCT TTGGTGATGT GTTTTTCCTT TATTATTCCT 
GCGGGAGCCG AAGAGCTGTC CCAAGATAAA AAGGCTTTGC TGGATATTAT GAATAAGAGT
TTTACAGAAA TGAACACAGA AATATCATCC ACTGCCACTG GTTCTGTAGA ATACAAATTG
AACCAACTGG GTGGCGGATT TTTGATGATG GTACCAGAAT TAAGTAAATT GCAGGGAGCT
AAGTTGGGTT TTGACTATAA GCTAAATGCT CCTGCGGGCC AAATGGCAAT GCAATGGAAA
ATAAATTATC AAGGCAAAAG CTACCAGGGG GATATCTATC TTGCAGGGTC CAAAGTGATC
TTTACCAAGG ATGTTTTTAA AATGGTCAAA GAAATAGACC CTACTGCAGA CATTCCAGAC
CTAAATACAC TGCCCCAGTA TCTGTATGTA GATGAACCGG AACTAACTCA GTTGTGGTCT
AGCCCATGGC TTGGCGCAAA AATTAAAGAT ATCTTGCCAT TACAAAACGA ACTAATGGCC
TTTATCCTAG AAGGAATGCC CAACGAATGC ATTAGCAATT CGGGTAATAA TTTGCGTATT
TCCATAAACC AAAAGCAATT TGCTGCTTGC TTAGCAGGTT TGGTGGAAAA AGCCGAAAGT
GAACCAGAAC GCTTTGCGGA TCTGATGGCA AAATATATCA CAAGCCTGGA TGCTACCCAG
AGCTATGATG AAGTGAAGAA CGATATTCTG ACTGATATTA AGTCAGAAGA CAGTGAGATT
TCCAGTGCTG ATAATATCCT AAAATCCATG GAAGAAGCTG GGATTGAGTT AAAAAATCTG
GACTTTGATA CTCCCAAAGG CCAAAATGGC TCAAGCAAAT TTATCTTAAA TTTGAATATT
AAGGACACCA ACACCGCCAG TTCCATCGGT GAAATCAAGG TAACCGTTGA TCAAGTTAAA
TCTGGCAATC AGATAAAGGG AAATATGGAC TTTGACGTAA AATTCGCTGT TAAAGAGCAA
AACATGAATG TGAGCTTTAA GCTGGCAGGG GATTATGATC AATCCCAAAG GGATGCAGCC
TCTGATTTTA CATTAACAAT TGATGCGGCC CAGGGATCTA CAAAAATGTT TAATCTGGGA
CTGGACATAC TCTCAAAGGC AAAGGTTGAT AAGAATGTAA ACCCGGCAGT ACCCCAATTG
ACAAAGGAAA ACAGCCTTGA CTTTAGTCAG TTAACCAATG AATCTGATGT TGAGGAAAAA
AATCTTTTGC CCGGCTTGGA ACCAAAGGTT AACATTGTTC TAGATGACAT TCCCGTTGAT
TTTGATGTGC AACCCTTGGT AAAAGATGGC CGCACCATGG TACCTGTTAG AACTTTGGCA
GAAGCCCTGG GCTGCAGGGT AAATGCAGTA AACGATCAGG AAGTATATCT AGCTAAGGGC
AATCAGTATG TTATGATGAA GCTTGGCGAA AGAAAATATA CCGTCAACGG TAAAACGAAA
TTATTGGATG TGCCAGCCTA TGTGAAGGAT GGCAGAACCT TAGTTCCTCT CCGCTTTATT
GCTGAAGAAT TAGGCTGCCA GGTAGAAGCA GACGGTAACA TGGTTTACAT TACTAGTAAT
GAGTAG
 
Protein sequence
MKKFIVLLLS LVMCFSFIIP AGAEELSQDK KALLDIMNKS FTEMNTEISS TATGSVEYKL 
NQLGGGFLMM VPELSKLQGA KLGFDYKLNA PAGQMAMQWK INYQGKSYQG DIYLAGSKVI
FTKDVFKMVK EIDPTADIPD LNTLPQYLYV DEPELTQLWS SPWLGAKIKD ILPLQNELMA
FILEGMPNEC ISNSGNNLRI SINQKQFAAC LAGLVEKAES EPERFADLMA KYITSLDATQ
SYDEVKNDIL TDIKSEDSEI SSADNILKSM EEAGIELKNL DFDTPKGQNG SSKFILNLNI
KDTNTASSIG EIKVTVDQVK SGNQIKGNMD FDVKFAVKEQ NMNVSFKLAG DYDQSQRDAA
SDFTLTIDAA QGSTKMFNLG LDILSKAKVD KNVNPAVPQL TKENSLDFSQ LTNESDVEEK
NLLPGLEPKV NIVLDDIPVD FDVQPLVKDG RTMVPVRTLA EALGCRVNAV NDQEVYLAKG
NQYVMMKLGE RKYTVNGKTK LLDVPAYVKD GRTLVPLRFI AEELGCQVEA DGNMVYITSN
E