Gene Dred_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1044 
Symbol 
ID4956812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1118218 
End bp1118634 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content37% 
IMG OID640180214 
Producthypothetical protein 
Protein accessionYP_001112404 
Protein GI134298908 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAT TATCCCAAGA TAAAGGGTTT ACGCTTGTAG AATTGTTAGT TGCTTTGGCT 
ATTTTGGCAA TTCTTATTGT TGCATTCACC ACTTTTTTTG GGTGGAATAT AACAAGTATT
TTGGAGACAG GTAAAAGAAG TGAAGCTATT GCAAATGCAG AGAAGAAGCT GGAAGAATTG
TACTATAAGG AAGACAGAGA ACTGTATTTT ACCAATAAAA CATATCTGAA TGATCCGACT
GAGGGCGAGT ATGTAGAAGA TCCTGATAAT ATTAATTCTT ATGATGGACG GAATAGGAAA
TTTTGCGTAG AGCCTTATGT TAGCGGGGTT GTTAAGGGCT ATACAGTTAC TGTGGTGGCC
TTTTACCAGA ACGGACAGCG TCATGTTACA ATTTCCTCAT TTATAGAAGC TGATTAG
 
Protein sequence
MKGLSQDKGF TLVELLVALA ILAILIVAFT TFFGWNITSI LETGKRSEAI ANAEKKLEEL 
YYKEDRELYF TNKTYLNDPT EGEYVEDPDN INSYDGRNRK FCVEPYVSGV VKGYTVTVVA
FYQNGQRHVT ISSFIEAD