| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1022 |
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| Symbol | |
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| ID | 4957338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1094473 |
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| End bp | 1096137 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640180192 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001112382 |
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| Protein GI | 134298886 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACCG TTGCACCGAA AAGTTTAATA GGCAATATTC TTCTTGAAAA GGGTGCCATA
AGTCAACAGC AGCTAAGGGA AGCCCTAAAT AACCATCGTC AGACCGATCA ACCTTTGGGA
CAAGTACTTG TTGATTTGGG TTATGTCACT AAGAAACAAG TATCCCAATA TTTGGATTAC
CAGGAGCAAA TGGAAGAAGA AGTCATTCAT ATACAGGAAA TTGATAAAGC CCTTCTAAAG
CTCTTCTCGG AACAGATCCT TCGCAGATAT AAGATATTTC CTCTTTTTAA AAAGGGCAAT
AAACTAACTG TTGCTATGGC GGAACCAGCC AATGTGATTG CCATTGATGA TTTAAAAGTG
ATTTCCAATC TGGATATTGT GCCGGTGGAG GTTCAGGAGC AGATCATTGA ATTAGCCATA
GACCTCTACT ACGACATTAC AAAAAGGGAA GTAAACGATA AAGAACAAAG ATTAGTCATT
ACGGATGAAG AAGAAGTCCC CATTATTCAG TTAGTTTACC AAATCATTGA CAGGGCCATT
GACCAAGGGG CCAGTGACAT TCATATTGAA CCTCAGGAAA AGAGAGTGAG GATCCGATAC
CGTATTGATG GGATGCTGAT ACTGGGCATG GAATTAGCAC CTACACTAGA TAAAGCCATC
ATTTCCAGAA TAAAGATCAT GTCGCAACTG AATATTGCCG AAAAAAGAGT ACCCCAGGAT
GGCCGCATCC AGTATGGGAA GCAAAGCCGG AATTTTGATC TGCGGGTTTC CACTATGCCC
ACAGTCTATG GGGAAAAGGC AGTTATTCGG ATTCTAAATC CCGAAAGCAT AAAAAAATAC
CAGCTTGCAC AATTGGGATT CTCCGCCTAT AATTTGAAGA GCTTTCAGAA ATGTCTTAGG
GCCACCAGTG GGATGGTACT AATTACCGGC CCCACAGGTT GTGGTAAAAC AACAACCCTA
TACGCTATTC TAAATGAACT AAACCTTGAG GACAGAAATT TTAGTACCAT TGAAGACCCG
GTAGAATACC GTCTGGAAGG AATTAATCAG ACCCAGGTTA ATACCAAGAC GGGCATGACC
TTTGCCGTAG GGTTACGTGC TCTTTTGCGG CAGGATCCAG ATATCATTAT GGTGGGTGAA
ATTCGAGACC GGGAAACTGC TGAAATTGCT GTAACTGCAG CCGGTACAGG ACACTTGGTA
TTTTCTACCT TGCATACTAA CGATGCACTG GGTGCACTGG ACAGGCTTAT TCACATGGGG
CTTGAGATTT TTCAAGTGGC TTCCTCTGTA TTGGTGGTTG TAGCACAGCG CCTGGTTCGC
AAGCTCTGTC CCTACTGCAA GGAGGGCTAC TTAGTTGAAA CCAAGTCTCC TGAATATGCT
TTTTTACAAA GCACTCCTTG GCAGGATCAT ATTTTTTATA AAGCAAAAGG TTGTGTGCAT
TGCAACTTTA TTGGCTATCG CGGGCGCATG GCCATACAAG AGGTGTTGCA AGTTAATGGT
AATATCCGTA AACTGCTGGT AGAAAGGGCT CCTAGCGGTG AATTAAAGAA AGCAGCCCTC
CAGGGGGGCA TGACAACCCT TAAAACTGAT GGTATAGAGA AGGCCCTTCA GGGCTTAACC
AGTATCCCAG AAGTTATGCG GGTGGCCTAT TCCGATGAGG AATAG
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| Protein sequence | MLTVAPKSLI GNILLEKGAI SQQQLREALN NHRQTDQPLG QVLVDLGYVT KKQVSQYLDY
QEQMEEEVIH IQEIDKALLK LFSEQILRRY KIFPLFKKGN KLTVAMAEPA NVIAIDDLKV
ISNLDIVPVE VQEQIIELAI DLYYDITKRE VNDKEQRLVI TDEEEVPIIQ LVYQIIDRAI
DQGASDIHIE PQEKRVRIRY RIDGMLILGM ELAPTLDKAI ISRIKIMSQL NIAEKRVPQD
GRIQYGKQSR NFDLRVSTMP TVYGEKAVIR ILNPESIKKY QLAQLGFSAY NLKSFQKCLR
ATSGMVLITG PTGCGKTTTL YAILNELNLE DRNFSTIEDP VEYRLEGINQ TQVNTKTGMT
FAVGLRALLR QDPDIIMVGE IRDRETAEIA VTAAGTGHLV FSTLHTNDAL GALDRLIHMG
LEIFQVASSV LVVVAQRLVR KLCPYCKEGY LVETKSPEYA FLQSTPWQDH IFYKAKGCVH
CNFIGYRGRM AIQEVLQVNG NIRKLLVERA PSGELKKAAL QGGMTTLKTD GIEKALQGLT
SIPEVMRVAY SDEE
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