| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0912 |
|---|
| Symbol | |
|---|
| ID | 4955882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 972478 |
|---|
| End bp | 972834 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640180083 |
|---|
| Product | sigma-70 region 4 domain-containing protein |
|---|
| Protein accession | YP_001112273 |
|---|
| Protein GI | 134298777 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTGC GTTTTATAAA GAAAGTTAAG GCAGAGGTTT CATTGTATGA CCCCATTGGT
GTGGATAAAG AGGGAAATGA GATAAGTTTA ATTGATATTC TGGGAACAGA TCCAGAAGTT
GTGGCAGATA CAGTTGAATC AACCTTTGAA AAAAACAGAC TCTTAGAAAA GATAACAAAA
CTAACCACCC GTGAAAAGAG AGTTTTAGAA ATGCGTTTTG GTTTAGGGAC AACGGCAAGA
AAAACCCAGC GGGAAATTGC CCGCACTCTG GGGATTTCCC GTTCCTATGT TTCGCGTATT
GAAAAAAGGG CATTAAATAA ATTGACCAAG GAATTCATTG CAGAAGGCTG CCAATAG
|
|---|
| Protein sequence | MHLRFIKKVK AEVSLYDPIG VDKEGNEISL IDILGTDPEV VADTVESTFE KNRLLEKITK
LTTREKRVLE MRFGLGTTAR KTQREIARTL GISRSYVSRI EKRALNKLTK EFIAEGCQ
|
|---|
| |