Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0874 |
Symbol | |
ID | 4957127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 934741 |
End bp | 935361 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640180046 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001112236 |
Protein GI | 134298740 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000967944 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATG GGAAACGGGT TACATTTTTT CGTGAAAAAT TAGGAATTAG TAAAAGAAAA TTAGCAAAAA TGATAGGTGT AGATCCCTCA TTAATAACAA AGATTGAAGC AAATAATACT AAGCCATCCT TAGATACTTT GGAGAGAATT TGCACTTCTT TGGGAATCGA GCTTGCAGAT TTTTTTGCAG AAGAATGCAA ACAATTAAGA GTAGTATCAG ATGATTTAAA ATCATTAATA TATGATTTAA GAGATCTTCG TTCTTCTCAA TTATTAGCTA TAAAAAAAAT TATTTCTGAA TTTAGATTAG TCAATCAATC TATATCTAAT ACTTTAAGCA ATGAGGTCTT GGACTTATTT AATTCAAAAG AAGCAATTAC CATTGCTGGT AAGCCTATAT CATTAGAAGA AAGAATTCAG ATCCTAGAGG CTTTAAGAGA TATCCTTTCC CAAGAAGAAA CACCAACTAA CGAAGATGAC GAAGTTCTTG TAGCCAGCTA CGAAGGTGAC CAGTTATTTC ATCTACCCAC TCCAGAAGAG GCTGAAGACA TTCAAAGGGC TATAAAAGCA GCGATGGAGC AAAAGAGAAA AGACCAAAGC AATAATAACC AGTCAGAATA A
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Protein sequence | MNYGKRVTFF REKLGISKRK LAKMIGVDPS LITKIEANNT KPSLDTLERI CTSLGIELAD FFAEECKQLR VVSDDLKSLI YDLRDLRSSQ LLAIKKIISE FRLVNQSISN TLSNEVLDLF NSKEAITIAG KPISLEERIQ ILEALRDILS QEETPTNEDD EVLVASYEGD QLFHLPTPEE AEDIQRAIKA AMEQKRKDQS NNNQSE
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