Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0777 |
Symbol | |
ID | 4956239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 830400 |
End bp | 831770 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640179950 |
Product | VanW family protein |
Protein accession | YP_001112140 |
Protein GI | 134298644 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000309113 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTGGTTA AGAGAAAAAA GCTTCTAGTT ATAGGCCTGC CTATTGTTTT TTTGTTATTA ATAATTACTT TTCTGGCATC CCAGATGAGC TTTGCTCCTC GGGACAAAAT ATTACCAGGT GTATATATGC AGAATATTGA ATTGTCTGGG ATGGATTATA ATCAGGCTAT AGCCTCTATA GGAAAACTAG AGCAGCAATT CCAAAAGCCC ATTCAAGTAA AGTATAAAGA TCAAGCCTGG GTATTACCAA TGAGCCAAGT TGGTCTAAAA ATTAACTGTA AAAAAGAAGT TCAAAGGGCC CTGGATTTCG GGCGTAAGGG GACCCTCAGA CAGCAGTTTT TAGAACGCAG ACAGGCCTTT AGGGGTGCTT ACCTGAAGCC TGATATTTCC TTGGACAAGA ACCTCTTGGA AAAATTAATT GTAACAGACG CAGCGGTCAT TATATTGCCA CCTCGGGATG CAGGCTTAAT TATCCATGCG GATAATCGTG TTGAAGTATC CCCGGGACGT AGCGGCCGAT TAGTAGATAT TGATCATTTA GAATCAAAAA TTATAGAAGC TTTACTAAAG GGCATTAGTT CCCCTATTGA GTTAAAGCTA ATAGATGTCC CCCCCATTCG TTCCACGGAA CAGGTTAAAG TAATGGGTGT AAATACATTA TTAGGAATGT TTTCCACTAA ATTTGATCCA AACAAAGTTA ATCGGGCTTA CAATGTTAGT GTGGCAGCAG CAGCCCTTGA CGGTTTGACA GTAAGCCCCC AGGAAGTTAT TTCCTTTAAC GAAGTGGTGG GTCCTCGAAG TACAGAGGCT GGGTATAAAA ATGCCCCGAT CATCGTAAAC AATGAAATGG TAGATGGCTT GGGCGGTGGT GTATGTCAGG TATCCACTAC ACTTTATAAT GCCGTGTTGT TGGCCAATTT AGAGGTGGTT GAAAGAACCA ATCACTCTTT ACCCATTCCT TATGTACCAA TTGGAAGGGA TGCCACAGTG GTGTTTGATT CCATAGACTT TAAATTTAAA AACAATACAA ACTATTGGTT GTACATTCAG TCCTATGTTA AGGGTGGCAC CCTAATAATT AAAATCTTTG GTAATTCGGA GTATAAGAAG GATGTAGTTA TTCGAAGCTG GGTTGAAGAA ACCTATGATC CCAAAACTTT GGTTGAGGAT GATTATGGAA TACCTTTGGG AGATCGGGTA GTGCGACAAA GGGGAGCCAA GGGATACATG GCCACAGGGG AACGAATCAT TATGAAAGAT AACATAGTCA TTAAGGTAGA AAAACTCCCC ACCAGTATCT ATAAAGCAAG AAACCAAATT ATCTCGCAGG GTATGGCACC CATAGGTACC ATTCTTAAAA ATCCTAATTG A
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Protein sequence | MVVKRKKLLV IGLPIVFLLL IITFLASQMS FAPRDKILPG VYMQNIELSG MDYNQAIASI GKLEQQFQKP IQVKYKDQAW VLPMSQVGLK INCKKEVQRA LDFGRKGTLR QQFLERRQAF RGAYLKPDIS LDKNLLEKLI VTDAAVIILP PRDAGLIIHA DNRVEVSPGR SGRLVDIDHL ESKIIEALLK GISSPIELKL IDVPPIRSTE QVKVMGVNTL LGMFSTKFDP NKVNRAYNVS VAAAALDGLT VSPQEVISFN EVVGPRSTEA GYKNAPIIVN NEMVDGLGGG VCQVSTTLYN AVLLANLEVV ERTNHSLPIP YVPIGRDATV VFDSIDFKFK NNTNYWLYIQ SYVKGGTLII KIFGNSEYKK DVVIRSWVEE TYDPKTLVED DYGIPLGDRV VRQRGAKGYM ATGERIIMKD NIVIKVEKLP TSIYKARNQI ISQGMAPIGT ILKNPN
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