| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0744 |
|---|
| Symbol | |
|---|
| ID | 4955664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 797512 |
|---|
| End bp | 798768 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640179918 |
|---|
| Product | copper amine oxidase domain-containing protein |
|---|
| Protein accession | YP_001112108 |
|---|
| Protein GI | 134298612 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3858] Predicted glycosyl hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TTCTGTCTTG TATAATGACC CTTACCTTGT TCACCCTTTT CTTGGTTCAG
CCTAGTTTTG CCAATTCAAC CAAAGAAATG ACTGTGTTTG TAAACGGTTC ATCGGTACAA
TTTGATGTAC CACCTATGGT ACAAGATAAC CGTACCTTAG TTCCTTTCCG TGCTCTGGCA
GAAGCCCTTC AGGTTAACGT TACCTGGGAT GGTTCTACCC AAACCATTCG TGCTAAGGAT
GCACTAACAT ACATTGTGCT GCGTATAGGT GATAAGACAG CCTACCATAA CGATTCGTCT
ATTACCATGG ACGTGCCCCC ACAGATTATC AATGGAAGAA CCCTGATTCC ATTGCGCATC
TTTAGTGAAG CTTTTAATTG CCAGGTATCC TGGGATGCGG CAAGCAATTC CATTTATATC
CTATCAGCCC AAAGTCAAAC CTCTTGGCCT TTGGAAGTTA TGGGATACTA TGCTTTGGGA
GATCTCCAAA CCAGTAGTTG GACAAACCTT TTTGGCCACC CCTTCCCCAA CCATAGCAGT
GGTAACACTG ATATAGTGAA AAACATAGCC CTGGGATGGT ACAGTCTTGA TGCAGATGGT
AATCTCTTGA TCAAAAGTCG TACTGGTTGG CAAAGACCGG AAGACTATAA AAAAGTGCTG
GCAGCAGCAG ATCAGTACAA AGTTATAACT CAAATGGTTG TACATATGAC AGATGAAGAT
AACTCATTAA CTAACTTATT GTCCAATGAA TCAGCCATGG AGAAGGCTGT GGAAGCTATT
GTTAAGGAAG CTAAAACCTA TCGAGGTGTA AATCTTGACT TTGAAGGCTT AGGTCTACGT
GACAAAGATG ACCAACTTAC CTTAGTTCAA AACCGCTTCA CTCATTTTGT TACTTTATTA
GCCAAGGAAC TTAGAAACCA TGACCTCAAA CTTATCCTTT CTCTACATGC ACCGAACAGT
GCTTACAAAG GCTATGACTA TGAAAATTTG GGGAAATTGG TAGATAGTAT CGTGATCATG
GCCTATGATT ATGGTTCTAA ACCAGAACCC ATTGACCGTG TGCGTGAGGC TATAATAAAT
GTCCTGCAAG TGGTTCCGGC CGAAAAACTG TATTTGGGAG TATCAATTCC CAATGAAACT
TCCTCCAGCT TGGGAACCAA ACTGGATATT GCCAAACAGT ATCATTTAAA GGGCATTGCA
ATTTGGCGTC TGGGTCTAGT TACCCCAGAT ATGTGGCAAC TGTTAAGAGA AAAATAA
|
|---|
| Protein sequence | MKRFLSCIMT LTLFTLFLVQ PSFANSTKEM TVFVNGSSVQ FDVPPMVQDN RTLVPFRALA
EALQVNVTWD GSTQTIRAKD ALTYIVLRIG DKTAYHNDSS ITMDVPPQII NGRTLIPLRI
FSEAFNCQVS WDAASNSIYI LSAQSQTSWP LEVMGYYALG DLQTSSWTNL FGHPFPNHSS
GNTDIVKNIA LGWYSLDADG NLLIKSRTGW QRPEDYKKVL AAADQYKVIT QMVVHMTDED
NSLTNLLSNE SAMEKAVEAI VKEAKTYRGV NLDFEGLGLR DKDDQLTLVQ NRFTHFVTLL
AKELRNHDLK LILSLHAPNS AYKGYDYENL GKLVDSIVIM AYDYGSKPEP IDRVREAIIN
VLQVVPAEKL YLGVSIPNET SSSLGTKLDI AKQYHLKGIA IWRLGLVTPD MWQLLREK
|
|---|
| |