| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0663 |
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| Symbol | |
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| ID | 4956384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 714457 |
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| End bp | 716040 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640179837 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001112027 |
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| Protein GI | 134298531 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC TGCGCCTTCG CTTAGATTTT AATGATCGAG TAGGCATTGT CTATGATGTA
GCCAAGCTTG TCTCACCAAA AAATATTAAC ATTATATCCT TACAAGTTTT ACCCAATACC
ATGTACCTGG AACTTAATTA TCTGTCAGAT CAGGAGACAG AAGTATTAAA AAGAGAATTT
CAAAATATCC CTGGGGTAAA GCAGGTGGAA CCTGTTGAGG TTATACCCCA GGAAGAAAGG
GAACGGCAAC TCAAGGCAGT ACTTGATTCT GTTAGTGATG GTATTATTGC AGTGGATCGC
AAGGGAAAAA TCACTTTTTT TAATCCTACC TGCGAAAAAA TACTTTTTGT TTCGGCCGAA
CATGCCGTGG GACGTGATGT GGCAGAGGTA ATTTCAACGG ACATCCCCAT GATTAACAGC
CTAAAAACCG GGGAGGGGTA TGATAACAAA GAGATTATGA TTACCACCCC CAGGGGACGC
CATCATTACT TAACCACTGG CAGGCCAATT AAAGATCAAA CTGGCAAGGT AATCGGTATG
GTGGCAGCCC TCAAGGATAT GCATCAGGTG CGGGATTTGG TTTACTCAGT AACAAAGCCT
TCTATGTTTA CCTTTGAAGA CATAGTTTAT GGAAGTGAGG CAATGGAAAG AGTGGTGGCA
ATAGCCAAAA GAGTTGCTCA CAGTGAGTCC ACAGTGGTCA TTAGAGGGGA AAGCGGAACA
GGCAAAGAAT TATTTGCCCG TGCTATTCAT ATGGAAAGCA TGCGTAGTAA CAAGCCCTTT
GTTCCTTTAA ACTGTGCTGC ATTGCCGGAC ACTCTGCTGG AAAGCGAGCT TTTTGGTTAT
GCAGATGGGG CGTTTACAGG AGCTAAGAAA GGCGGTAAAC AGGGGCTTTT CGAATTTGCC
CATGAAGGTA CGTTGTTTCT GGATGAAATA GGGGAACTTT CACCGCACCT GCAGGCAAAG
CTACTTCGAG TTTTACAGGA TGGAAAAGTA AGAAGAATTG GTGACCGACA GGAAACACCT
GTGAATGTTC GAGTTATTGC AGCCACCAAT CGAAATCTGG AAGAGATGAT GGCCCGGGGG
GATTTTCGAG AGGATCTATA TTACCGGCTA AATGTTTTTC CCATCAGAGT TCCAGCTCTG
CGTGAGCGAC CCGAGGATAT TCCCTTTTTG GTTCATCATT TTCTTAAAAA ATTTACACAA
CACCCAGATA AAAAGATATC TGGGATTTCC ACAGGGGCCC TGCGTATTTT AACCAGAAAC
CGGTGGACAG GGAATGTGCG GGAATTACAA AATGTCCTTG AAAGGGCCAT AAACCTGGTG
GAGAATGGCG ATATCAAAGA GGAACATATC ATATTAGACG AAGAGCGGAT AATTGAAGGT
AGCGGCTGTG TTTTGGATAA AATGATGCAG GGCACCAGCT TAAAAGAAGC TGCTGCCAGG
GCTGAACTGG ACGCATTACA AATTGCCCTT AATACCTATG GTACAGCACG TAAGACTGCA
AAGGCTTTAG GAGTGTCCCA TACAACGGTG TTAAATAAAA TTCGTCGTTT TGGTTTAAAA
TATCCAATTG AAAGAAAACA ATAA
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| Protein sequence | MENLRLRLDF NDRVGIVYDV AKLVSPKNIN IISLQVLPNT MYLELNYLSD QETEVLKREF
QNIPGVKQVE PVEVIPQEER ERQLKAVLDS VSDGIIAVDR KGKITFFNPT CEKILFVSAE
HAVGRDVAEV ISTDIPMINS LKTGEGYDNK EIMITTPRGR HHYLTTGRPI KDQTGKVIGM
VAALKDMHQV RDLVYSVTKP SMFTFEDIVY GSEAMERVVA IAKRVAHSES TVVIRGESGT
GKELFARAIH MESMRSNKPF VPLNCAALPD TLLESELFGY ADGAFTGAKK GGKQGLFEFA
HEGTLFLDEI GELSPHLQAK LLRVLQDGKV RRIGDRQETP VNVRVIAATN RNLEEMMARG
DFREDLYYRL NVFPIRVPAL RERPEDIPFL VHHFLKKFTQ HPDKKISGIS TGALRILTRN
RWTGNVRELQ NVLERAINLV ENGDIKEEHI ILDEERIIEG SGCVLDKMMQ GTSLKEAAAR
AELDALQIAL NTYGTARKTA KALGVSHTTV LNKIRRFGLK YPIERKQ
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