Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0643 |
Symbol | |
ID | 4955816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 692849 |
End bp | 694126 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640179817 |
Product | polysaccharide deacetylase |
Protein accession | YP_001112007 |
Protein GI | 134298511 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTTA ACGTTTTTAA GCTCGCTGGC ATAGCATTCT TTATTTACAT ACTGTTACCA ACATTCCTGG GCAGGGTCCT TTCCATTGGA TCCTATCGTA GGGGAAACAA ACACTCAGGC AAAGTGGCCT TAACCTTTGA TGACGGGCCG GATCCACTTT TCACCGCCCA GGTCCTCGAT ATTCTTCAAC AGTATAATGC CAAAGCAAGC TTTTTCGTGG TAGGTAACCA CGCCAAAAAA CACCCGGAAT TAATTCAACG TATCCTAGCA GAGGGACATA GCTTGGGCAC CCATGGCTAT CACCACAGCT TTGCTTGGCT GCAAGGACCT ATTGCTTCCA TTCGAGAAAT AATGCTGGGA CATAAGTCAA TAGCATTGAT AGATGGTAAA TTGCCACTAT ACTTCCGCCC CTCCTGGGGG GTCTTTAATC TAGCAACCTA CCTATATACG CTGTTGTCCC AACAAAAAAC GGTACTCTGG ACTTTCATGA CCTGGGATTG GGATGCGAAA TCCTCTGCGG AAAGTATCCA TGATATTGTT ACCCGCAAAA CTAGGTCCGG CTCTATTATT GTCTTTCATG ACCGTTGCAC CGGCTTTGGT GCGGCGGCAG AAGGACCAGT CAAAATGGTG CAGGCTCTGC CGATTATCCT TAAGGAACTG AAATGCAAAG GCTTAGAACC TGTAAATCTG GAACAATTAA TGCTTTACGA TGACGTTGGC TTTATAAAGA AAAACCTGCG CAGGTTATGG CAGGTTTGGG AGTTATGTTT TGATCGAATA GCTGGCCTAA AGCCAGTTGG TAATGAGGGA TTATTTCGTC TAGCAGTAAG AAGTTATAGA GGACAGACCT TGAAACTACC AGACGGTACT TTATTATCTC CTGGGGATAA GGTAATAGAG CTTCACTTAA ATAATGACTT TCTGCAACAA CTTACAACAA AAGCCCGTTC TCTGGAGGCA ACAGCCATTG CCCTGCTGCG AGAAACCCGA CGTTCGTTAC CACTACTGGC TAAGTTTATT TCTCAGGACC CTGCTTGCAA CGGTACTAAG GCCCTCATAG GCATCACTAT GATTCACAGG GGTACTCCCC AGCTAGGATT TACGGTCTAC GATTTATCCC CTAGGATTCG TTCCCTAGTG GCCTGGTATC AAAGATGGTT GTTGTTTTTA ATGCATCCCG GTGGACTATC CCACATTCGT CGCCAGTGGA GCAAACTGGT ACCAAAAAAG GTGATCATTA CCCGTAATGA GCTTTTAAAT CGCTATCTAC TGAGGTAA
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Protein sequence | MYLNVFKLAG IAFFIYILLP TFLGRVLSIG SYRRGNKHSG KVALTFDDGP DPLFTAQVLD ILQQYNAKAS FFVVGNHAKK HPELIQRILA EGHSLGTHGY HHSFAWLQGP IASIREIMLG HKSIALIDGK LPLYFRPSWG VFNLATYLYT LLSQQKTVLW TFMTWDWDAK SSAESIHDIV TRKTRSGSII VFHDRCTGFG AAAEGPVKMV QALPIILKEL KCKGLEPVNL EQLMLYDDVG FIKKNLRRLW QVWELCFDRI AGLKPVGNEG LFRLAVRSYR GQTLKLPDGT LLSPGDKVIE LHLNNDFLQQ LTTKARSLEA TAIALLRETR RSLPLLAKFI SQDPACNGTK ALIGITMIHR GTPQLGFTVY DLSPRIRSLV AWYQRWLLFL MHPGGLSHIR RQWSKLVPKK VIITRNELLN RYLLR
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