| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0539 |
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| Symbol | |
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| ID | 4957594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 583830 |
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| End bp | 586181 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640179718 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001111908 |
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| Protein GI | 134298412 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC AACTAAAATC ACACCCACAC CTTTTTTTAC ACCAGCACAT TGAGCAGGTT
AACCAGGCCA CAAAGGCAAT AAGAGATTGG CATACTACTG ACACAATAAC CAATGATATA
AAGTTATTGC TGGGCCATCT GGCCAAATAC CATGATTTGG GCAAGGGTAC CCCTGCCTTT
CAGGAATATA TCGAAAATCC AGAGGGTTAT CAGGGTGATC CCCAGGAGAA GGCCCATTCA
ACTCTTTCTT TACTGCTGAC ACTGGCCATT GCAAGGCAGC AATCCTGGGA GGAGTTACAC
ACCCTGGTCA TTGCCGCCGC TGTTGCCGGG CATCACAGCA GACTGCCAAC CATCCCGGAG
AAGAAAATAG GGGGCGTATG TTGCCCCCAA TGGGATATCG ACGGCTTTGC GGGGGGAGAA
AAGGCGTCAC TCTTGAAACG GCAATTAGCC AGCATCGATT TCCCTGCACT AGAGCAGGAA
ACAAAGGTAG AATTTGGGTC TTATGGTTTG GCCCAGGCAT TGCAAAGCGA CCCAGCCAAA
TCTTTGAGGG AAATGAAGAG ATTTTTAATC ACAAGAATAT ATGGCATATT TGCCTCCCTA
AGTTTGGAAG AAGCCCTAAG ATTAAGAATG AAGGCGCAAC TGCTCTATTC GGTTTTACTG
GAAGCGGATA AGGCTTTGCT GGCAGTATCC AGCCCAGAGG TGTATTTAAA CAGAGAGGTT
CGGCATTGGC AGTCCCGGTG GGTTGAGGAT AAAATTGGCA AGCCCCCGGA GACCTCAATT
AATCAATTGA GACAAAGGGC AAGGCAAGGG GTAATTGCCG CACTGGAGGC CAAAAACACC
AACCTTTACA GTCTCACCGC TCCAACAGGC TGTGGCAAAA CCATGCTGGC AGCCACTTGG
GCCCTTAAAT TAAGAGAACG GGTGACCGAA GGACAGGCTC CGCCCAAGAT TATCATTGTA
CTACCATTTT TATCAGTCAT CGACCAAACG GCCAGGGAAT ATGCCAGGCT ATTATCCCAC
AGTGGGCAAG AAACAGATGG TCGCTGGCTT ATCCAGAGCC ATTCCCTGGC CGATCGCCAC
TACGCCAGGG GGTTAGAGGA TGAGGACGGT CGTTTTTTTA TTGATACCTG GCGCAGTGAA
ATAATCATTA CAACCTATGA CCAGTTTTTA ATGAGTTTGT TAGATCCCCG GGCTAAGTAC
CAAATGAGGT TTCATAATCT GTGTGATGCC ATGATAATCA TGGATGAAGT ACAAGCATTG
CCTTGTAAAT TATGGCAGAC ACTGGAAAAG GTATTTCAGG CCCTAGCCAG TGAGGGCAAT
AGCAGGTTGC TACTGATGTC AGCCACGCTA CCGCCCTTTA TGAAAGAGGC ACTTCCTTTA
TTGCCGGACT ACCAAGGATA TTTTACCCTG TTTAATCGTT ACACCCTGCA ACTACGGCTA
CAGGAATCAC AGACGTTGGA TAATTTCTGC GAAGAAATGT CAGACAGATT GATTGGTTGG
CTGGAATGTA GCAATCGCAT TCTGATCACC CTAAATACCC GCCACAGTGC TCGCAGGGTG
CGGGATTTTC TTAGCCAAAG TTGGCCTGCT GAGTATGGAG ATGTGCCGCT GTTCTTTATC
AGTGCCGATG TGACACCAAA GGACAGGCTG GAAATAGTAA AACAAATCAA ACAGGGCAAA
CCCTGTGTTG TTGTATCAAC CCAGTGTATT GAGGCCGGTG TGGATATTGA TATGGATCGA
GTTATCCGGG ATTTTGGCCC CCTGGACAGC ATTATTCAAA TTGCCGGAAG ATGCAACCGT
GAAGGGCTAA GGGCCCAGGG TGTCGTTGAG GTGGTGGATT TAATCAATGA ACAGGACAAA
AGATATTCAG AAATGATATA TGATACTACC CACCTGCAAA TTACCAGAAA AATTTTAGCA
GATAAGCAGG AAATTCAGGA GAAGGAAATA ATAACTTTAT CCACTCAGTA TTTTAAAGAT
TTAACCGAGC AAAAGGATAC TGGGTACAAT CATTTGATAC GCTTTGCCAA ATGGCAGGAG
GATACGCCGG TAAAGGAGCT GCTTAGGGGT AAAGAACGAT TGCAGATAGA TTTTTTGGTG
TTGGAACAAG ATGCAGAGTT GAGGGATGAA ATGCAGATAG TGGGCCGTAT AAAGGACAGG
TGGGAAAGAA GGGAAGCGTG GAGAAAACTG TCCGGCAGAA TTGCCCTTGT TTCAGTTAGT
ATTTTTGCCC AACCAGGTTT CCACCCAGAA CAAATAGCAG ATGAATTCAT GGGGAGTTGG
TGGGTGGTTC GGGAGGGTTA TTATAACAGT AAACAGGGAT TATTGATTGA GGGAGAAACA
ATGATTTTAT AG
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| Protein sequence | MTEQLKSHPH LFLHQHIEQV NQATKAIRDW HTTDTITNDI KLLLGHLAKY HDLGKGTPAF
QEYIENPEGY QGDPQEKAHS TLSLLLTLAI ARQQSWEELH TLVIAAAVAG HHSRLPTIPE
KKIGGVCCPQ WDIDGFAGGE KASLLKRQLA SIDFPALEQE TKVEFGSYGL AQALQSDPAK
SLREMKRFLI TRIYGIFASL SLEEALRLRM KAQLLYSVLL EADKALLAVS SPEVYLNREV
RHWQSRWVED KIGKPPETSI NQLRQRARQG VIAALEAKNT NLYSLTAPTG CGKTMLAATW
ALKLRERVTE GQAPPKIIIV LPFLSVIDQT AREYARLLSH SGQETDGRWL IQSHSLADRH
YARGLEDEDG RFFIDTWRSE IIITTYDQFL MSLLDPRAKY QMRFHNLCDA MIIMDEVQAL
PCKLWQTLEK VFQALASEGN SRLLLMSATL PPFMKEALPL LPDYQGYFTL FNRYTLQLRL
QESQTLDNFC EEMSDRLIGW LECSNRILIT LNTRHSARRV RDFLSQSWPA EYGDVPLFFI
SADVTPKDRL EIVKQIKQGK PCVVVSTQCI EAGVDIDMDR VIRDFGPLDS IIQIAGRCNR
EGLRAQGVVE VVDLINEQDK RYSEMIYDTT HLQITRKILA DKQEIQEKEI ITLSTQYFKD
LTEQKDTGYN HLIRFAKWQE DTPVKELLRG KERLQIDFLV LEQDAELRDE MQIVGRIKDR
WERREAWRKL SGRIALVSVS IFAQPGFHPE QIADEFMGSW WVVREGYYNS KQGLLIEGET
MIL
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