Gene Dred_0512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0512 
Symbol 
ID4957337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp548172 
End bp550142 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content43% 
IMG OID640179692 
Producthypothetical protein 
Protein accessionYP_001111882 
Protein GI134298386 
COG category[S] Function unknown 
COG ID[COG1479] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.507612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAT CCGAAACCAA ATTACAGGCA ATTATTGAAG GCAACAAACA ATACATAGTC 
CCTCTGTTCC AAAGAACCTA TAGCTGGGAG AAAAAAGACT GGGAAATGCT CTGGAAGGAT
ATTATGGAAC TGCTTGAGGA AGACAACCCC CGCAGTCACT TTATCGGTTC CATCGTAACC
ATGCCTGCGG CCTCCGTACC CGAAGGAGTA CCCAAATACC TTTTAATCGA TGGTCAACAG
CGTCTAACCA CCATATTTAT ACTCTTGGCA GCACTGCGGG ATAAAGCCAC GCAATGTAAA
CAAACTCTAT TAGGCGAAGA AATTAACAAC ACCCTACTGG TAAATCCCTA TAAAAGTGGG
CTGGATCACT ACAAATTACA ACCGACCCAG GTAGACCGAG CATCTTTTCA TAACATCATA
GACGACAATT CCATAAGCTC CGTGGATAAA ATTACAGGGG CTTATCAATT TTTTGAGAGA
AAGCTAAAAC CTGAACACAT TGATGCAGAG AAAATAAAAG ATATCATTAC CGGGAAGCTA
TCCATTGTTA GCATCGTACT AGACCCGGAT GATAACCCTT ATCTGGTATT TGAAAGTCTA
AACGCCAAAG GGCGCCCCCT TACACAATCG GATTTAATTC GTAACTATTT CTTCATGCGA
ATCCATGTCA GTGAACAAGA AAAAATATAC CACCAATATT GGAAACCGAT GGAGGAAGCA
TTGGGTGAAA CCCTTACCGA ATTCATCCGG CATTATCTCA TGAGAAATGG TGCCAATGTG
AAACAAAGTG ATGTCTATTT CTCCCTCAAA GAGATAATCA ATCGGGAAGA TGCCCTCACT
TACCTAAAAG TATTGTCTCG CTATGCCGGC TACTATGAAA AATTGTTAAA CCCCATGAAA
GAAGAAAAGC TAAACCTCCG CAAGGCCCTG CAGCGTATCA ATTGCATCGA AGTCAATACC
GCCTACCCGT TCCTATTAAA CTGCTATGAG GACTATTTCA ATCAAGTAAT CAGTGCAGAT
GAATTTTACG AGGTGCTGAA GACCATCGAA AATTTTGCCA TCAGAAGGTT TGTCTGTAAC
GTACCAACAA ACACATTAAA TAAAATATTT CCTGCCCTTT ACAATCAGGT ACTAGCTAAG
AAAGCCGAAT CCTTTGCCAG TGGAGTAAAA GACATTTTGC AAACAAAGGG TTATCCTAAG
GATGTGGAAT TTACAGCTCG CCTGCAAGAT GTTAAGCTCT ACGGCAGCGG TGATCGTGCC
GTGAAAGCTA AATTAATTTT AGAGACCTTC GAAGAATCTT ATCAGCATAA AGAACAAGTA
CCGCTAGATG ATTGTAGCAT TGAGCATATC ATGCCCCAAA CCCTTACAGA GGGCTGGCAA
AGCTACCTGG GTGAAGACTG GGAACTCACT CACGAGTTAC TCCTGCATAC CATTGGTAAC
CTGACCCTAA CCAAATATAA TTCCGAGTTG TCTAATCTGG ACTATAACAG CAAGAAGCAG
CTTCTCCAGG AAAGTCACTT AGAAATCAAT AAATTCTTCC AAGATGTAGA CACCTGGAAG
AAAGAAGACA TCAAAAAACG CTCCGAGCAC CTGGCAGAGT TAGCACTGCA AATCTGGCCC
TACTTTGGTG AAGCCGGAAG TGAGCCAACC AATCAAACTG GCATTACCGG TACAACCCCC
ACCGGGCTAT GGATACTGGG GCAATACTTT ACAGTGTCTT CCTGGCGGGA CGTTTTAGAG
CAGACCCTAA ATACCATTGC CGAGCTAGAA CCGGAAAAAA TGGACTTAAT CATGCAACAA
TTCCCACGGT TTGTAGGACC CGATAAAAAC AAGTTCCGTG CCATACGTAC CCTGAAAAAC
GGGACCTTTA TAGAAGTGAA TTTGTCGGCT AAAAGTATCG AGAGATTCTG TTTTCAAGCA
CTGCAAGCTG TGGAGTTATC GAATGACGAT TGGAAAGTGG AGATAGCTTA A
 
Protein sequence
MKASETKLQA IIEGNKQYIV PLFQRTYSWE KKDWEMLWKD IMELLEEDNP RSHFIGSIVT 
MPAASVPEGV PKYLLIDGQQ RLTTIFILLA ALRDKATQCK QTLLGEEINN TLLVNPYKSG
LDHYKLQPTQ VDRASFHNII DDNSISSVDK ITGAYQFFER KLKPEHIDAE KIKDIITGKL
SIVSIVLDPD DNPYLVFESL NAKGRPLTQS DLIRNYFFMR IHVSEQEKIY HQYWKPMEEA
LGETLTEFIR HYLMRNGANV KQSDVYFSLK EIINREDALT YLKVLSRYAG YYEKLLNPMK
EEKLNLRKAL QRINCIEVNT AYPFLLNCYE DYFNQVISAD EFYEVLKTIE NFAIRRFVCN
VPTNTLNKIF PALYNQVLAK KAESFASGVK DILQTKGYPK DVEFTARLQD VKLYGSGDRA
VKAKLILETF EESYQHKEQV PLDDCSIEHI MPQTLTEGWQ SYLGEDWELT HELLLHTIGN
LTLTKYNSEL SNLDYNSKKQ LLQESHLEIN KFFQDVDTWK KEDIKKRSEH LAELALQIWP
YFGEAGSEPT NQTGITGTTP TGLWILGQYF TVSSWRDVLE QTLNTIAELE PEKMDLIMQQ
FPRFVGPDKN KFRAIRTLKN GTFIEVNLSA KSIERFCFQA LQAVELSNDD WKVEIA