Gene Dred_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0493 
Symbol 
ID4957158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp535138 
End bp536289 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content46% 
IMG OID640179674 
Productphage integrase family protein 
Protein accessionYP_001111864 
Protein GI134298368 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000132895 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGCC ATTTAGAAAA GCGGCACAAG AGTTCTTGGA CAATTATTAT TGACCTGGGG 
AAAGACCCCA TAACCAACAA ACGGAAGCGA ATGGTGAGAG GTTTTAAGGG TACAAAGAAA
GAAGCAGAAA AGGAAATGGC CCGCCTCATA GCCGAATATG AGACAGGCCA GTATATCGAA
CCATCTAAAA CCTGTTTGGG TGATTATATG CTACGCTGGC TAGAAGACTA CGGCAAACCA
AATCTGGCAC CTACCACCTA CTACTCTTAC AGCAAAATAG TCGAAAAGCA CATCATACCA
TCCATCGGGT CCATTATTAT CGAAAAGCTT CAGCCCATGC ATCTGCAACG GTACTACTCC
CAAAAACTGC AAACCTTATC GAATAGAACC GTTCAATACC ATCACCGGGT ATTAAAAGAA
GCACTCTCCC ACGCAGTCCA ATGGCAACTG CTCAACCGGA ACCCAGCAGA TGCGGTACAG
GCGCCTAAGA ACAAACAAAA AGAAATCGAG CTGCCAGACC TATCAAATAT CGACCGGATG
ATCCAGGCAT CCAAAGACCA CCCCGACCAC ATAATCATCA TCTCAGCAGT ATTCACCGGT
ATGAGAAGAG GCGAACTTCT TGGCTTACGT TGGCAAGACC TCGACTTTGA CAAAAACCTT
CTCTATGTAC GAAATACTTT GCAAAGGCTG CCCGACAAGG GAAAATTTTT TACCGAACCA
AAATCCAAGA AAAGCCGACG ACAAATCATT ATTCCTCATT TCTTAACTAA CTTACTAAAA
GACCATCGTA AAAAACAGCT GGAGGAGCGG TTTAAGCTTG GGCACCTATA TCAGGACCAC
GACCTAGTAT TCCCAAGACC CGATGGCACA CCAGCCGACC CCGGCACCGT CAGCCATCGC
TTTAAAGCTC TGGTTGATAA AATTGGCCTT TCGGGCCTGC GCTTTCATGA TTTAAGGCAC
TTCCACGCCA CCTTACTTCT AGCTGAAAAT ATTAACCCTA AAAAAGTACA GGAACGCCTG
GGACACCAAA CCATAAGTTT AACTTTAGAT GTTTACTCTC ACCTAATTCC CAGCATGCAA
AATGAGATCG CCGAAAAGCT CGAAGAGATA TACGGGCACC GATTCGGCAC CGAAAAGAGA
AAAGGCCAGT GA
 
Protein sequence
MPGHLEKRHK SSWTIIIDLG KDPITNKRKR MVRGFKGTKK EAEKEMARLI AEYETGQYIE 
PSKTCLGDYM LRWLEDYGKP NLAPTTYYSY SKIVEKHIIP SIGSIIIEKL QPMHLQRYYS
QKLQTLSNRT VQYHHRVLKE ALSHAVQWQL LNRNPADAVQ APKNKQKEIE LPDLSNIDRM
IQASKDHPDH IIIISAVFTG MRRGELLGLR WQDLDFDKNL LYVRNTLQRL PDKGKFFTEP
KSKKSRRQII IPHFLTNLLK DHRKKQLEER FKLGHLYQDH DLVFPRPDGT PADPGTVSHR
FKALVDKIGL SGLRFHDLRH FHATLLLAEN INPKKVQERL GHQTISLTLD VYSHLIPSMQ
NEIAEKLEEI YGHRFGTEKR KGQ