Gene Dred_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0420 
Symbol 
ID4955308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp459510 
End bp460475 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content41% 
IMG OID640179590 
ProductSpoOM family protein 
Protein accessionYP_001111791 
Protein GI134298295 
COG category[R] General function prediction only 
COG ID[COG4326] Sporulation control protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000132469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA AGTTAATGGC TAGCTTTGGG GTAGGAGCGG CTAAGGTTAA CTTGTTGTTG 
GAAAAAGGAA GCTATCGTGT CGGGGAAACT GTTAATGGTA AGGTGATTGT AGAGGGAGGT
AACGTAGATC AGGATATCCA AAGTTTGGAT GTGGATGTTC TGATGAGAGT TATTATCAAG
GGCAAGGAAA TCAAACGGGT TTTAGATACC TTTCAAGTTG CACAAGAATT TCACGTGCGG
GCCAAAGAAA CTAAGGAAAT TGCCTTTGAG TATCCAATAC CTATACATTA CCCAATTTCC
AAGGGTTCAC TTTCCTACTC TCTCATAACT AGGATGGATA TCTCCCAGGC TGTAGATACC
GATGATAGCG ACCCCTTGGT GGTGTTGCCT ACTCGAGATA TGCAACTGGT TTTTGATGCA
TTTAAGAACT TAGGTTTTAA GGATAAAATT GGTTCCGGTA AAATAGAACA GTATGGACAG
CAGTTCGAAT TTATTCCAGG TTCTCTGTTT AATGAGCAGT TAAAGGAATT GGAATTAAAA
TTCTATTCCG ATCCCCATGG AGTAAAACTT TTAATGGAAA TAGAAATGAA TGGGGGCTAT
ATGAGGAATG GCATAGAGCA CCATACAGAA CTTACCCTCC CTGCTGATTT ACTAAGCAGT
GGTTCAGTGC AGCAATTGGC TGACCATATT AAAGTTTTTT TGGAAAACGA ATTGACTGTA
ATTTCTGTAC AGGGGCCGCG CATGGCACCC AGTTATCATA ATTACCAGCA AACTACCCAG
CATGGTTCAG GCATTGGGGG GTTTATGGGT GGCATGGTTA CCGGTATGTT AGGTGGTGTT
CTTCTGGGAA GCCTTTTTGA TGGCGGAGAA GAGGAGGATT CCAGTGGTAT GATTGCTGGT
GACGATGAAA ATGGCTTTGA CTTTGGTTTA GGTGATTTTA TGGATTTTGG TGATGATGAG
TTTTAG
 
Protein sequence
MFKKLMASFG VGAAKVNLLL EKGSYRVGET VNGKVIVEGG NVDQDIQSLD VDVLMRVIIK 
GKEIKRVLDT FQVAQEFHVR AKETKEIAFE YPIPIHYPIS KGSLSYSLIT RMDISQAVDT
DDSDPLVVLP TRDMQLVFDA FKNLGFKDKI GSGKIEQYGQ QFEFIPGSLF NEQLKELELK
FYSDPHGVKL LMEIEMNGGY MRNGIEHHTE LTLPADLLSS GSVQQLADHI KVFLENELTV
ISVQGPRMAP SYHNYQQTTQ HGSGIGGFMG GMVTGMLGGV LLGSLFDGGE EEDSSGMIAG
DDENGFDFGL GDFMDFGDDE F