Gene Dred_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0393 
Symbol 
ID4958314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp426022 
End bp426993 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content44% 
IMG OID640179562 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001111766 
Protein GI134298270 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC CACTCTTACA GGTTAAGGAT ATTAAAAAGC ACTTTCCTTT AAGGGGTGAC 
TTTTTAGCAA AGCCAACTGC CTGGGTCAAA GCCGTGGATG GTATTAGTTT TGAACTGGAA 
AAGGGAGAAG TCTTAGGTTT AGTAGGGGAA TCAGGCTGTG GTAAGACAAC TCTGGTTAAT 
GTGCTGTTGC GACTGGAAGA ACCAACGGCC GGGGAAGTTT GTTTTGAAGG TAAGAATATC 
TTTGCCCTAA ATCAAAAGGA ATTAAGAAAG TTAAGAGAGC ATCTGCAGAT CGTTTTTCAG 
GATCCCTTTT GGTCCTTAAA CCCCAGACTG TTGATTAGAG ATATTGTGGG GGAACCTTTA 
AAGGTTCATG GCAATCCCTC CACGGAAGAA TTAGCCGAAA AGGTTGCCGA ACTATTAGAA 
ATGGTAGGCT TACCCCGGGA TGGTGTTTAC AAATATCCCC ATGAATTTAG TGGGGGGCAA 
AGACAAAGAA TTGCCATTGC CCGGTCCCTG GCCCTGCGAC CCAAATTTAT TGTATTGGAC 
GAGCCCACCT CTTCCATTGA TGTTCTATCC CAAGCCCAAA TTCTGGATAT CTTAAAGGAT 
ATTAAGGACC AGTTTGGTTT GACCTATATC CTCATTTCCC ATGACCTGAG CGTTGTAAAC 
TATATGTCAG ATAAAATTGC CGTTATGTAT CTTGGTAAAT TGGTGGAGTA TGGGAGTGCA 
GACGAGGTGT TCAATAATCC GGCCCACCCC TATACCAGGG CATTGTTTGC TGCCATTCCG 
GATATCGAAA CCGAAGGAGT CGATTCCCTG GTGACTCTGG ATGAAAATGT GCCCAGTGCC 
ATTAACCCAC CGGCGGGATG CAGATTTCAT ACCCGATGTC CAGAAGCCAC ACCAATATGT 
CAATCCAAAG AACCTGTGTT AAAAAACTTA GGAAATCAAC ATTTGGCTGC CTGCCATAAA 
AATAACAACT AA
 
Protein sequence
MSTPLLQVKD IKKHFPLRGD FLAKPTAWVK AVDGISFELE KGEVLGLVGE SGCGKTTLVN 
VLLRLEEPTA GEVCFEGKNI FALNQKELRK LREHLQIVFQ DPFWSLNPRL LIRDIVGEPL 
KVHGNPSTEE LAEKVAELLE MVGLPRDGVY KYPHEFSGGQ RQRIAIARSL ALRPKFIVLD 
EPTSSIDVLS QAQILDILKD IKDQFGLTYI LISHDLSVVN YMSDKIAVMY LGKLVEYGSA 
DEVFNNPAHP YTRALFAAIP DIETEGVDSL VTLDENVPSA INPPAGCRFH TRCPEATPIC 
QSKEPVLKNL GNQHLAACHK NNN