Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0286 |
Symbol | |
ID | 4957291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 296297 |
End bp | 297553 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640179452 |
Product | 3-isopropylmalate dehydratase large subunit |
Protein accession | YP_001111660 |
Protein GI | 134298164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein [TIGR02083] 3-isopropylmalate dehydratase, large subunit [TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATAA CAGAAAAAGT ACTGGCTGCG GCGGCAGGCA AAGAAAGTGT AAAACCCGGT GAACTAATTA ACGCCAAGGT GGACCTTGTT TTGGCAAATG ACATTACAGC ACCGGTGGCC ATAAAAGAAT TCCAGAAGAT TGGCCTTGAT AAAGTTTGGG ATAAAAATCG GGTGGCCCTG GTGCCGGACC ATTTTACACC GAATAAAGAC ATTAAGTCTG CAGAGCAGGC AAAACTGGTA CGGGACTTTG CCCATACCCA GGAACTAGCA AACTACTTTG AGGTTGGCCG TATGGGGATT GAACACTGTC TGTTGCCCGA ACAGGGACTG GTGGGCCCCG GCGACGTTAT TATCGGGGCG GATTCCCACA CATGTACCTA TGGTGCCCTG GGGGCCTTTG CCACCGGCGT GGGCAGCACC GATTTGGCTG CTGCCATGGC CCTGGGTGAG ACCTGGTTTA AGGTACCGGA ATCCATAAAA TTTGTCTTTA ACGGTCAATT GAACAAATAT GTAGGCGGCA AGGATTTAAT TCTGCATACC ATTGGTCAAA TCGGGGTAGA TGGTGCTCTG TACAAAGCCA TGGAGTTTTG CGGAGAAGCC ATCAGTCAGT TGTCCATGGA TGGACGTTTT ACCATGTGCA ACATGGCCAT TGAAGCCGGC GGGAAAAATG GCATTATTCA GCCGGACGAA ATTACCAGAC AGTATGTGGA AGGACGGACC AAGCGACCCT ACACCTTCTA TACCAGTGAC CCCGATGCCC AATACTCAAA GGTATATGAG TTTGATGTTA ACAAAATAGA ACCCCAGGTG GCCTTCCCCC ATCTGCCGGA AAATGCCCGC CCGGTAAGTC AGGCCGGCCA TGTGGACATT GATCAGGCGG TTATTGGTTC TTGCACCAAC GGTCGTATGG AGGATTTGCG CCTAGCTGCT GAAATCCTCA AAGGGAAAAA GGTTCATCAG CAGGTTCGTT TAATTGTAAT CCCGGGTACC CAGGAAATCT ACCGCCAGGC CATGCGGGAA GGCCTCTTTG AAATCTTCCT GGATGCCGGG GCCGTTGTCA GCACTCCCAC CTGTGGTCCC TGTCTGGGCG GACACATGGG AATCCTGGCC AAGGGAGAAC GCTGTATTGC CACCACCAAC CGTAACTTTG TAGGCCGCAT GGGTCATGCT GAAAGCGAAG TTTATCTGGC CAACCCGGCA GTGGCGGCTG CCAGTGCCAT TACCGGACGT ATTTCTCATC CCCAGGAGGT GCTGTAA
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Protein sequence | MTITEKVLAA AAGKESVKPG ELINAKVDLV LANDITAPVA IKEFQKIGLD KVWDKNRVAL VPDHFTPNKD IKSAEQAKLV RDFAHTQELA NYFEVGRMGI EHCLLPEQGL VGPGDVIIGA DSHTCTYGAL GAFATGVGST DLAAAMALGE TWFKVPESIK FVFNGQLNKY VGGKDLILHT IGQIGVDGAL YKAMEFCGEA ISQLSMDGRF TMCNMAIEAG GKNGIIQPDE ITRQYVEGRT KRPYTFYTSD PDAQYSKVYE FDVNKIEPQV AFPHLPENAR PVSQAGHVDI DQAVIGSCTN GRMEDLRLAA EILKGKKVHQ QVRLIVIPGT QEIYRQAMRE GLFEIFLDAG AVVSTPTCGP CLGGHMGILA KGERCIATTN RNFVGRMGHA ESEVYLANPA VAAASAITGR ISHPQEVL
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