Gene Dred_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0278 
Symbol 
ID4957177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp284575 
End bp285957 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content50% 
IMG OID640179444 
Productargininosuccinate lyase 
Protein accessionYP_001111652 
Protein GI134298156 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACTTT GGGGCGGTCG TTTCCAGAAA ACCACCGATA GTTTAGTGGA GGACTTTCAC 
TCCTCCATTT CCTTTGATCA GAGACTATAC AAACAGGATA TTCGGGGTAG TATTGCCCAT
GCCACCATGC TGGGCAAGGT AGGCATCATT TCACTGGAGG AAGCTGCTCA AATCGTCACC
GGCTTAAAGC AAATACTGGA GGAAATTGAG GCAGGTAAAG TGGAATTTGA TGTGGCTGCC
GAGGATATCC ACATGAATGT GGAGCAACTT CTCACAGCCA AAATAGGAGC AGTGGGGAAG
AAACTGCATA CAGCCCGCAG CCGCAACGAC CAGGTGGCTG TGGATATACG GATGTACCTA
AAGGATGAAA TTATCGAGAT TCGGGCTCTT CTGAAGGAAC TGGTGGAAAC CCTATTGAAC
CTAGCCGAAC AGCACACCAA TACCGTGATG CCCGGGTATA CCCATATGCA GCGAGCCCAG
CCCATTACCT TTGCCCACCA TCTGATGGCT TACAGCCAGA TGTTTATGAG GGATATGGGA
AGGCTGACGG ATTGTTATAA ACGGACTGAT GTGATGCCCC TGGGTTCCGG TGCCCTGGCC
GGTACAACCT TTCCTTTGGA TCGGGAGTAT ACAGCAGAAC TTCTGGGTTT TGCGGCAGTA
AGTGACAACA GCTTGGATGC GGTAAGTGAT AGGGATTTTG CAGTGGAGTT CTGCGCCGCT
GCTTCCCTGA TCATGATGCA TCTTAGTCGT TTTTGTGAAG AAATTATTCT CTGGGCCACT
GGTGAATTTG CCTTTATCGA CCTGGATGAC GCCTACAGCA CTGGTTCCAG CATCATGCCT
CAGAAGAAAA ATCCAGATGT GGCCGAACTC ATTCGTGGTA AAACCGGTCG GGTTTATGGG
GACCTGATGG GGTTATTAAC CATGCTCAAG GGTTTGCCCA TGGCCTATAA CAAAGATATG
CAGGAAGATA AAGAAGCCCT TTTCGATGCC ATGGATACCG TCAAAGGCTG TCTAATGGTC
TTTCGACCCA TGCTGGCCAC CATGACCGTA CGGCAGGAGA ACATGGCCAA AGCGGCCCGG
GGAGGCTTTA CCAACGCCAC CGATGTGGCT GACTACCTGG CCAAAAAAGG TGTGCCCTTC
CGGGAAGCCC ATGAAGTTGT GGGCAAGGCA GTATTTTACT GTCTGCAACA AAATAAAGCC
CTAGAAGAAC TGACCCTAGA GGAATACAAG GAGCTTTCTC CGGTTTTCGA AGATGATATC
TATGCCGCCA TCGGTGTTGA ATATTGTGTT GCAGCCCGCA AGGTTAGAGG AGGGCCGGCA
CCGGAGGCCG TTCAACAGGC CATTACCAGA ACCAAGGAAC GGTTAAAACA GCTAGGAGAA
TAA
 
Protein sequence
MKLWGGRFQK TTDSLVEDFH SSISFDQRLY KQDIRGSIAH ATMLGKVGII SLEEAAQIVT 
GLKQILEEIE AGKVEFDVAA EDIHMNVEQL LTAKIGAVGK KLHTARSRND QVAVDIRMYL
KDEIIEIRAL LKELVETLLN LAEQHTNTVM PGYTHMQRAQ PITFAHHLMA YSQMFMRDMG
RLTDCYKRTD VMPLGSGALA GTTFPLDREY TAELLGFAAV SDNSLDAVSD RDFAVEFCAA
ASLIMMHLSR FCEEIILWAT GEFAFIDLDD AYSTGSSIMP QKKNPDVAEL IRGKTGRVYG
DLMGLLTMLK GLPMAYNKDM QEDKEALFDA MDTVKGCLMV FRPMLATMTV RQENMAKAAR
GGFTNATDVA DYLAKKGVPF REAHEVVGKA VFYCLQQNKA LEELTLEEYK ELSPVFEDDI
YAAIGVEYCV AARKVRGGPA PEAVQQAITR TKERLKQLGE