| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0236 |
|---|
| Symbol | |
|---|
| ID | 4957919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 242325 |
|---|
| End bp | 243071 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640179402 |
|---|
| Product | methionine aminopeptidase, type I |
|---|
| Protein accession | YP_001111610 |
|---|
| Protein GI | 134298114 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0067703 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACGA TAAAAAATGA ACGTGAACTG AAATATATGC GGGATGCCGG TGGCGTAGTG
GCGAAAACCT TTAAGATTCT TAACGATATG GTTAAGCCAG GTGTTACCAC CAAGGAGCTT
GACGCTAAAG CAGAGGATTT TATTATTAGT CAAGGTGCCA GACCGGCATT TAAAGGGTAC
GGCGGTTTTC CAGGTACCCT GTGCACTTCT GTGAATGATG AAGTTGTTCA TGGAATTCCC
GGTTTAAGAA AACTGGAAAA TGGGGATATT ATTAGCATTG ATTGTGGTGC GGTAATAAAT
GGTTTTGTTG GTGACAGTGC CCTTACCCTT CCTGTGGGAA ACATCAGTCA TGAAGCTCAG
GAACTATTAA GGGTCACCGA AGAATCTTTA TACGCCGGCA TTGCTCAAGC AGTGGAAGGT
AATCGTCTTT CAGATGTTTC TCATGCAGTA CAAAAGTGTG CTGAGAAACA GGGCATGTCA
GTCGTTCGGG ATTATGTAGG GCATGGCATA GGGGCCAAAA TGCATGAGGA TCCGCAGATT
CCCAATTTTG GGCCTCCTGG CCGCGGGCCC AGGCTTAAGC GGGGAATGAC ATTAGCAATT
GAACCAATGG TAAACCTAGG CACCTTTGAG GTACGTACCC TTGATGATAA TTGGACGGTC
GTAACTCTTG ACGGAAGGTT GTCTGCTCAC TTTGAACATA CAATCGCCAT AACCGATGAT
ACACCAGAGA TCCTAACAAA GCTTTAA
|
|---|
| Protein sequence | MITIKNEREL KYMRDAGGVV AKTFKILNDM VKPGVTTKEL DAKAEDFIIS QGARPAFKGY
GGFPGTLCTS VNDEVVHGIP GLRKLENGDI ISIDCGAVIN GFVGDSALTL PVGNISHEAQ
ELLRVTEESL YAGIAQAVEG NRLSDVSHAV QKCAEKQGMS VVRDYVGHGI GAKMHEDPQI
PNFGPPGRGP RLKRGMTLAI EPMVNLGTFE VRTLDDNWTV VTLDGRLSAH FEHTIAITDD
TPEILTKL
|
|---|
| |