| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0229 |
|---|
| Symbol | rpsH |
|---|
| ID | 4957507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 238516 |
|---|
| End bp | 238914 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640179395 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001111603 |
|---|
| Protein GI | 134298107 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000764714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATGA CTGATCCCAT TGCGGATTTT TTAACACGGG TTCGCAATGC TAACACTGTT
TACCATGATA AAGTAGAAGC CCCGGCCTCC AACGTAAAAA AGGCTATTGC TGAAATCCTG
AAGCAAGAGG GCTACATTAA AGACTACGAA TCCGTTGAAG ATGGTAAACA AGGTATAATT
AGACTCTATC TTAAGTATGG CGCCAACAAA CAACGCGTTA TTACCGGCCT GAAAAGAATT
TCTAAGCCCG GTCTGCGTGT GTACGCAAAG AAAGATCAAA TCCCTAGAGT ATTAGGTGGA
CTAGGTATCG CCATTGTATC CACATCAAAA GGAATTATGA CCGATAAACA AGCACGTCAA
TCCGGTCTCG GTGGCGAGGT TATTTGCTAC GTCTGGTAG
|
|---|
| Protein sequence | MVMTDPIADF LTRVRNANTV YHDKVEAPAS NVKKAIAEIL KQEGYIKDYE SVEDGKQGII
RLYLKYGANK QRVITGLKRI SKPGLRVYAK KDQIPRVLGG LGIAIVSTSK GIMTDKQARQ
SGLGGEVICY VW
|
|---|
| |