Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0195 |
Symbol | thyX |
ID | 4955541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 210438 |
End bp | 211178 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640179356 |
Product | FAD-dependent thymidylate synthase |
Protein accession | YP_001111569 |
Protein GI | 134298073 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00699129 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTAAAG CATCTTTAAA AGTACGACTG CTGGAGCACA CCCCAAATCC AGAAAAGGTT GTGGCCATGG CGGCTAGGCT ATGTTACTCT CCATCTGATA TTGACAGTTT AGCCGAGAAT GTTTCCACCA CCGACCAACA TTCCTTTATA AAAAAGCTAA TGGATTTGGG TCACTATAGT ACCATAGAAC ATGTTACCTT TACCTTTGGG ATTGAAGGGG TATCCCGGAG TTTGTTAGCC CAGATAACCA GACATAGAAT CGCCAGCTTC AGTGTACAGT CCCAACGATA TGTAGGTGAA ACCCGCAGTC AGAATAATGA AGGAACCTTT GGTTATATCA TTCCTGAAAC TATTTTGGGT TTAGGGCCAG AAGCCGTAGC AGAATTTGAA GAACAAATGG CCCAGATTCA AGCCTGGTAT GACAGATGGG TAGAAAAACT GGGAAGTGGA CGGGGAGCTT ATGAAGACGC CCGGTTTGTT CTACCTAATG CTGCAGAAAC TAAGATCGTA GTTACCATGA ATGCTCGTGA ACTAAGACAC TTTTTTAGCC TTCGCTGTTG TCAGAGGGCC CAGTGGGAAA TTCGGGCACT GGCGGATGAA ATGCTTAGGC TGGCCAAAGA AGTGGCTCCG TTGCTCTTTG CAGATGCAGG ACCAGAATGC CTGGTGGGGC CCTGTCCCGA AGGAAAAATG AGCTGTGGTA AGAGAATGGA AATACGGAAA AAATATGGAG TAGACTCATA A
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Protein sequence | MGKASLKVRL LEHTPNPEKV VAMAARLCYS PSDIDSLAEN VSTTDQHSFI KKLMDLGHYS TIEHVTFTFG IEGVSRSLLA QITRHRIASF SVQSQRYVGE TRSQNNEGTF GYIIPETILG LGPEAVAEFE EQMAQIQAWY DRWVEKLGSG RGAYEDARFV LPNAAETKIV VTMNARELRH FFSLRCCQRA QWEIRALADE MLRLAKEVAP LLFADAGPEC LVGPCPEGKM SCGKRMEIRK KYGVDS
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