Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0097 |
Symbol | |
ID | 4958170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 103178 |
End bp | 104395 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640179251 |
Product | threonine dehydratase |
Protein accession | YP_001111472 |
Protein GI | 134297976 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR00260] threonine synthase [TIGR01124] threonine ammonia-lyase, biosynthetic, long form [TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA GCATAGTAAC TTTGCAAAAT ATTTTAGAGG CTAGGGAGCG ACTCAAGGGA GTTAGCAGAT TTACACCCTT AGAACCCTCA GAAGCCTTTA GCAAGATGAC AGGAGCAAAC GTTTTTTTAA AGCTGGAGAA TTTGCAAAAG ACTGGCTCTT TTAAACTACG GGGTGCCTAT AACAAAGTAG CAGCCCTAGC AAAGGAGGCA GCTAGGGGTG TGGTGGCAGC TTCAGCAGGC AATCATGCCC AGGGTGTTGC CTTTGCATCC AGCCAAGCGG GTATTCCGGC TACAATAGTT ATGCCCGAAG GGGCACCCAT TACAAAGGTT GAGAGAACCA AAGCCTATGG CGCTGAAGTA GTTCTTTCGG GGCAGGGGTA CGACGATGCC TTTCGGAAGG CTCAAGAAGT TCAGCAGGAA AAGGGCGCTG TTTTTGTACA TGCCTTTGAT GACCCTCTGG TCATTGCAGG ACAGGGAACC ATTGGTCTGG AAATACTGGA AGAGCTCCCC GATTTAGATG CCGTTGTTGT ACCCATTGGT GGAGGTGGAT TAATTGCCGG AGTGGCCTGT GCCATCAAAG AACAAAGACC TGGGGTACAG ATTATTGGTG TGCAGGCTGC GGATGCCCCT TCTATGCTGG AGGCCTGGAA AATTGGTAAA GTGCAGGAAT TAAAATCTGC GCAAACCATT GCAGACGGTA TCGCTGTACG TCGACCAGGG GATCTTACCT TTGAGATGGT TCGTAGATAC GTTGATCAAA TTGTTACCGT TGATGATGAA GAGATTGCCC GGGCCATCTT AATGCTGCTG GAAAGTTCTA AACTAATGGT AGAGGGTGCA GGCGCAGTGG GCATTGCTGC ATTGCTTCAT AAAAAATGTG ATCTATCTGG TAAAAAGGTT GCAGTGATCC TTAGTGGAGG CAATATTGAT GTAAATGTTA TGTCAATGAT TATTGAAAGA GGTCTGATAA AGGCCGGGCG TTATTTAAGA TTTAAGACTA TCCTGACGGA TAGACCGGGA TCTTTGCAAA AACTGCTGTC TAACCTTGCT CAATCCGGTG CCAATGTAAT ATCAATTGTA CACGATCGTA TCAAGCCCAA CGTACCCCTT AAACAAGCAG AGGTTGAAAT ATCTTTGGAG ACAAGAAATG CAGAGCACAT AGCGCAAATT GTCGAATCAT TGGGTAAAAT GGGGTATGAG TTAGATATAT TGAGATAA
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Protein sequence | MDKSIVTLQN ILEARERLKG VSRFTPLEPS EAFSKMTGAN VFLKLENLQK TGSFKLRGAY NKVAALAKEA ARGVVAASAG NHAQGVAFAS SQAGIPATIV MPEGAPITKV ERTKAYGAEV VLSGQGYDDA FRKAQEVQQE KGAVFVHAFD DPLVIAGQGT IGLEILEELP DLDAVVVPIG GGGLIAGVAC AIKEQRPGVQ IIGVQAADAP SMLEAWKIGK VQELKSAQTI ADGIAVRRPG DLTFEMVRRY VDQIVTVDDE EIARAILMLL ESSKLMVEGA GAVGIAALLH KKCDLSGKKV AVILSGGNID VNVMSMIIER GLIKAGRYLR FKTILTDRPG SLQKLLSNLA QSGANVISIV HDRIKPNVPL KQAEVEISLE TRNAEHIAQI VESLGKMGYE LDILR
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