Gene Dred_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0087 
Symbol 
ID4957829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp92834 
End bp94069 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content42% 
IMG OID640179241 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_001111462 
Protein GI134297966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA TGTTGGTGGG AATAGACGTT AGCTTACAGT CTCACCATGT ACAATTTATG 
GATGGAGACG GAGGGGCATT GGCTTCTTTT TCTATTCACA ACAATCGGCA GGGGGCCGAC
ACCCTCATTC AAAAGATTGT TGATACATCT GATAGAATCA AAAGTCAATC CCTTCGAATT
GGTATGGAGG CAACTTCAAA TCTGGGTTGG CACCTTGCTC ACTATTTGCA AGAACAGCTT
CAAACCACTT GCCCCCAAAA AGATACACAG ATTTACGTTC TTAATGCACG AAAAGTGGCC
CGTTTCAAAA AGGGGTATGA CACCCTCCCA AAGAACGACC GCATCGATGC CTGGGTAATT
GCAGACCACC TTCGTTTTGG TCGACTACCT CATGCCATGA AAGACATTAT TCAATACGAG
GCTTTGCAGA GGCTTACAAG GACACGATTT CACCTGATGC AAAATATCAC TCGGGACAAA
ACCTATTTTC TTAATCAGGT CTTCTTAAAG TTTAGTGGTT TACGCCAGGA TAACCCATTT
TCCAATCTTT TTGGCAGCAC CTGTCTTGCT GTTATCCAAG AACTAGAACC GGAACAAATT
GTAGCCATGT CTATGGAAGA ACTGGTTGAT TTCTTAAAGG ATAAAGGGAA AAACCGTTTC
GATAATCCGG AGGAAATTGC TCTTTATCTT CAAAAAATTG CCCGGTCTTC TTATCGACTG
AACAAGGCGA TGGCTGACCC TGTGAATATT TCTTTGGCCA CTATGCTTAA TGTAATTAAA
CATATGGAAT CGGAAGTGAA AAAACTGGAC AAAGAAATCG CCAAAATCAT GAAGGGCCTT
CCCCAAACTT TAACTTCCGT TAAAGGGATT GGAGATGTTT TTACCGCCGG AATCATGGCA
GAAACCGGAG ATATCCAACG CTTTAAAGAC CATAATGCTC TGGCTAAATA TGCCGGTTTA
ACTTGGAACC AACATCAATC AGGTGAATTT GAAGCCGAAG ATACCAGCAG AACCAGGACC
GGGAACAAGT ATCTTCGTTA TTACTTAATT CAGGCTGCTG ATTCTGTACG GAAGCATGTT
CCTGAGTACA AAGACTTCTA CCAAAAGAAA TATGATGAAG TACCAAAACA CAAACATAAA
AGGGCTCTCG TCTTAACCGC TAGAAAACTG GTACGGTTGG TGTTTTCGCT ACTAAACACC
AGGCAACTGT ACACTTCACC AGAGAGGAGG GGGTAA
 
Protein sequence
MSQMLVGIDV SLQSHHVQFM DGDGGALASF SIHNNRQGAD TLIQKIVDTS DRIKSQSLRI 
GMEATSNLGW HLAHYLQEQL QTTCPQKDTQ IYVLNARKVA RFKKGYDTLP KNDRIDAWVI
ADHLRFGRLP HAMKDIIQYE ALQRLTRTRF HLMQNITRDK TYFLNQVFLK FSGLRQDNPF
SNLFGSTCLA VIQELEPEQI VAMSMEELVD FLKDKGKNRF DNPEEIALYL QKIARSSYRL
NKAMADPVNI SLATMLNVIK HMESEVKKLD KEIAKIMKGL PQTLTSVKGI GDVFTAGIMA
ETGDIQRFKD HNALAKYAGL TWNQHQSGEF EAEDTSRTRT GNKYLRYYLI QAADSVRKHV
PEYKDFYQKK YDEVPKHKHK RALVLTARKL VRLVFSLLNT RQLYTSPERR G