Gene Dred_0017 details

Gene Information

• Locus tag: Dred_0017
• ID: 4955967
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 26061
• End bp: 26516
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640179170
• Product: CMP/dCMP deaminase, zinc-binding
• Protein accession: YP_001111394
• Protein GI: 134297898
• COG category: [F] Nucleotide transport and metabolism; [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0590] Cytosine/adenosine deaminases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.484063
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCTCATG CTTTGTTCAT GCGTGAAGCA TTGATCGAAG CCCAAAAGGC TGCGGTAAAG 
GGTGAAGTGC CCATTGGGGC TGTTGTTGTG TGGAAGGATG AAGTGATAGG CCGGGGATAT 
GATCTTCGGG AAAGCCTATG TGATGCTTCT GCACACGCTG AGATATTAGC TATGAGGAAA 
GCAGCTAAAC ATCTAGGTGA TTGGCGTCTA AATGATGCAA CTCTCTACGT AACAGTGGAA 
CCCTGTGCCA TGTGTGCTGG GGCCATCGTA CAATTTAGAA TAAATCGCCT GGTATATGGT 
GCTCCCAATG CTAAATCTGG CTCAGTGGAT ACGATTTTAA ATATTGTTCA AGAAGCTAGG 
TTTAATCACA GGGTAGAAGT TATTGCCGGT ATTTTGGAAG ATCAATGCAA GGAAATAATA 
CAAAATTTTT TTCGTGAATT AAGAAAGAAT AAATAA 

 

Protein sequence

MSHALFMREA LIEAQKAAVK GEVPIGAVVV WKDEVIGRGY DLRESLCDAS AHAEILAMRK 
AAKHLGDWRL NDATLYVTVE PCAMCAGAIV QFRINRLVYG APNAKSGSVD TILNIVQEAR 
FNHRVEVIAG ILEDQCKEII QNFFRELRKN K