| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0006 |
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| Symbol | |
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| ID | 4956641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 4808 |
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| End bp | 6724 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640179149 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_001111383 |
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| Protein GI | 134297887 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.014329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAAC AGCAGCAGAA TAATAAATAC AGTGCTGACC AAATACAAGT ACTGGAAGGA
TTAGAGGCAG TAAGACGCCG TCCGGGTATG TACATTGGTA GTACCAGTGC TCGGGGCCTG
CATCATTTGG TATACGAAGT TGTAGACAAT AGTATTGATG AGGCCCTAGC CGGCTATTGT
GATAAGATTA TTGTAACTAT TCAAGAGGAC AATTCCATTA CTGTTGAGGA CAATGGACGG
GGGATACCTG TGGATCTGCA CCCCAAAGTA GGTCGACCTG CTGTAGAGGT AGTTTTAACG
ATGCTGCACG CAGGCGGTAA ATTTGGGGGT GGTGGATACA AGGTTTCTGG CGGTTTGCAC
GGTGTAGGGG TATCTGTGGT AAATGCTTTA TCAAAATACT TGTCCGTAGA AATTAAAAGA
AATGGCAAGA TATACAAACA GGAGTATTCC CGTGGTATTC CAACCACAGA ACTACAAATC
GTAGGAAACA GCAAAACAAC CGGCACCAAA GTAACCTTTA AACCCGATGA GGAAATATTT
GAGGAACTGG TTTTTAGTCT TGAAACTTTA TCTCAGAGAA TCAGAGAACT GGCGTATTTA
AATAAAGGGA TTAAAATTAT ACTTCAGGAT AAAAGAAAAG ACCCGGTTGC TGAACAAATT
TTTCAATATG ACGGTGGAAT TAAAGATTTT GTTAAGCACC TGAACAGAAA TAAGCAGACG
ATACACACAA AACCTATTTA TGTATCCGGA GAAAAAGAAC AAATAGTTGT TGAAGTTGCT
ATTCAATACA ATGACGGTTA TACCGAAAAT ATGTTATCTT ATGCTAACAA TATTCACACA
GTTGACGGCG GGACCCATGA AGTAGGATTA AAAACTGCCC TTACCCGGGT GATTAATGAC
TATGGTAGAC AGCATGGCGT TTTAAAAAAT AACGATGCAA ACCTGTCTGG GGAAGATATC
CGGGAAGGTG CTACCATTGT CATAAGTGTA AAAGTACCAG AGCCTCAATT TGAGGGTCAA
ACAAAGACAA AACTGGGCAA CAGTGAAGTA AGGGGAATTG TAGATTCTAT CTTTGCTGAA
AAGTTATCTA CCTATCTGGT AGAAAATCCT TCTGTGGCTA AAAAAATTAT TGAAAAAGGA
ATCACAGCGG CCAGGGCCAG GGAAGCAGCC CGTAAAGCAC GGGAACTTAC TCGCAGGAAA
AGTGCTTTAG AAACCATGTC TTTACCAGGT AAACTGGCAG ATTGCTCAGA AAAAGATCCA
AGCGTATCGG AGATTTACTT GGTAGAGGGT GATTCGGCGG GTGGTTCTGC TAAACAAGGT
CGGGAAAGAC GCTTTCAGGC TATCTTGCCC TTAAAGGGTA AAATTCTCAA TGTAGAAAAG
GCTCGTATGG ATAAGATCTT GGCCAATGAA GAAATTAGAG CCATGATCAC CGCCATGGGT
ACGGGTATTG GCGAAGATTT TGACATTGCT AAGGCTCGCT ATCACAAAAT TGTTATTATG
ACAGATGCTG ATGTGGATGG TGCCCACATT CGAACCTTGT TAATGACCTT TTTCTACCGC
TATATGAGAC AACTTATTGA AGCTGGTTAT GTTTTTGTTG CACAACCCCC TTTATATCGA
GTTCGTAAAG GAAAACATGA CAGCTATTGT TATAGTGACA ATGAATTAGA AGAATTATTA
AATAGAATTG GTCATGATAG AGTTAATATT CAACGGTACA AAGGTTTAGG TGAGATGAAC
CCGGAACAAC TATGGGAAAC CACGATGGAT CCAGACACTA GGACTATGTT ACAGGTTACA
TTAGAAGATG CCATTGAAGC TGATGCTACC TTCTCGATGC TTATGGGGGA CCGTGTGGAA
CCAAGAAGAG ATTTTATTCA GGAAAATGCT AAATACGTTA GAAATTTGGA TATATAA
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| Protein sequence | MDQQQQNNKY SADQIQVLEG LEAVRRRPGM YIGSTSARGL HHLVYEVVDN SIDEALAGYC
DKIIVTIQED NSITVEDNGR GIPVDLHPKV GRPAVEVVLT MLHAGGKFGG GGYKVSGGLH
GVGVSVVNAL SKYLSVEIKR NGKIYKQEYS RGIPTTELQI VGNSKTTGTK VTFKPDEEIF
EELVFSLETL SQRIRELAYL NKGIKIILQD KRKDPVAEQI FQYDGGIKDF VKHLNRNKQT
IHTKPIYVSG EKEQIVVEVA IQYNDGYTEN MLSYANNIHT VDGGTHEVGL KTALTRVIND
YGRQHGVLKN NDANLSGEDI REGATIVISV KVPEPQFEGQ TKTKLGNSEV RGIVDSIFAE
KLSTYLVENP SVAKKIIEKG ITAARAREAA RKARELTRRK SALETMSLPG KLADCSEKDP
SVSEIYLVEG DSAGGSAKQG RERRFQAILP LKGKILNVEK ARMDKILANE EIRAMITAMG
TGIGEDFDIA KARYHKIVIM TDADVDGAHI RTLLMTFFYR YMRQLIEAGY VFVAQPPLYR
VRKGKHDSYC YSDNELEELL NRIGHDRVNI QRYKGLGEMN PEQLWETTMD PDTRTMLQVT
LEDAIEADAT FSMLMGDRVE PRRDFIQENA KYVRNLDI
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