| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3272 |
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| Symbol | |
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| ID | 5696135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3940172 |
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| End bp | 3943060 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641265892 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001531152 |
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| Protein GI | 158523282 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCTT TTTTTCATCA TTCATCATTC CGCATTCATC ATTCCTTCAA ACGGGAGAAC
ACCATGAACA TCCTCATTGT CGATGACCGC GAAGAGAACC GCTACCTTCT GGAGCGCCTG
CTTCAGGGAA ACGGGCACAC GGTCCGGCAG GCTGCCAACG GGGCCGAGGC CATGGAAATA
CTGACGGCCG GCGGCATCGA CCTGGTCATC AGTGATATTC TCATGCCGGT GATGGACGGG
TTCCAGTTGT GTCGCAAGGT GAAAACCGAC GAAACCTTGC ACGCTATTCC CTTTATCGTC
TACACCGCCA CCTATACCGG CCCCCAGGAC GAGGCCTTTG CCCTGAAAAT CGGCGCGGAC
CGTTTTATTC AAAAACCCTG CGAGGTCGAC GTGCTGTTAT CGGCCATCAA CGAGGTAATG
GCCGTCGGTG GCGGCCGGGT GGCAGAGCCG GTACAGGAGG AGGAAGCCCT CAAACTTTAC
AGTGAACGGC TGATAAGAAA GCTGGAACAG AAAATGCTTC AGGCCGAACA GGAACTCCAG
GCTCGGCAGG AAGCCGAGCA GGCCCTGCGC GAAAGCGAGT CCCGGTTCCG GCTCTTGGCG
GAGACCGCGC CCGTTGGTAT CATTATCGAA GACCGGGATC AGAACGTCCT GTATGTGAGC
CCCACGTGTA TCTCTCTTTG CGGTTACGCG CCTGAAGAGA CACCAACAAT GGAGGCATGG
TTTTCGCTTG TCTGCCCCGA CGAAACCCTG AGAAACCGGG TGCGCGCGGA ATGGGCCGCA
GCGGTTGAAA CGGCAACAAA AACCGGGGTC GAAATTCAGC CCATGGAGTT TCCCGTCACC
TGCAGGGACG GCACGGTTCG GGATATTGAG TTTCGCATGT CCGCCACTCA GGACCTGGAT
TTTGTGGTGC TGTCCGATGT CACCAGCCGC AGGCGGGCCG AGCAGGCCCT GCGCGAAAGC
GAACGCAAGT ACCGTCGGCT GGCGGAAAAT ACGTCGGACG TGGTCTGGAC CGCGGACATG
AACCTGAACA CCACCTATGT CAGCCCCTCG GTGGAGCGAC TGGTGGGAGA ACCGGTCGGC
CTGCACATTC AGCGAACCAT GGAGGAAAAA TTTCCCGCCG ATTCCCTGAA CCGGCTTTAT
GCTGTTTTTG CCAAAGAGCT GGAAAACGAA AAAGACCCGG CCTGTGACAA AAACCGGTCC
CGCCTGGTGG AGGTTCAGCA CTTTCGGGCC GACAGCAGCA CCGTCTGGGT TTCGATCAAC
ATCTCGTTTA TTCGGGATAC CACCGGCCGG CCCATCGGAC TACAGGGCAT CACCCGGGAC
ATCACCGAAC GCAAACAGGC TGAACAGGCG CTGCGGGAGA GCGAGGAACG GTACCGGACC
ATTCTGGAAA ACATCGAGGC CGGTTACTAT GAAGTGGACC TGGCCGGCAA CTTCACCTTT
TTCAACCAGG CCATGTGCCA GATTCTGGGA TATGCGGAAG ATGAGCTGCT GGGCATGAAC
AACAGATCCT ACATGGACGA CGAAAACGCC AAAAAGGTGT TTCACACCTT CAACCAGGTG
TTCACAAGCG GAAAAACAGC CAAAGCCTTT GACTGGGAAC TGATTCGAAA AGACAACACC
CGCTGTTTTG TGGACACGTC GATTGCACTG ATGCGGGATG CCGAGAACAA CCCCGTGGGG
TTCCGGGGAA TCGCCCGGGA CATTTCGGAG TGGAAACAGG CCGAGGCGGA GCGGGAAAGA
CTTTCAACCC AGCTGCTTCA GGCCCAGAAA ATGGAGTCCG TGGGCCGGCT GGCCGGCGGC
GTGGCCCATG ATTTTAACAA CATGCTTTCC GTGATTCTGG GATACACGGA ACTGGCCATG
CACCGGGTGC CGCCCCACGA CCCCCTTTAC GAGGATTTAA GAGAAATTCT GTCCGCAGCC
AAACGCTCCT CGGAAATCAC CCGGCAGCTG CTGGCCTTTG CCCGCAAACA GACCAGCAGC
CCGAAAGTGA TCGACTTAAG CGACACCGTG GAGAACATGT TAAAGATGCT GCGGCGGCTC
ATCGGTGAAG ATATCGACCT TGCGTGGAAC CCCGGTCCGG GTCTCTGGAC CGTGAACATG
GATCCGGCCC AGATAAGCCA GATTCTGGCC AACCTGCTGG TCAATGCCAG AGACGCCATC
GGCGGGGTGG GCAAAGTCAC CATCGAGACC GGCAACGTCA GCTTTGATCA GGACTACTGC
GAAGATCACA ACGAATTTTT GCCCGGAGAC TATGTGGTGC TGGCCGTGAG CGACGACGGT
TGCGGCATGG ACAGAAAAAC CCGGGACCGC CTGTTCGAGC CCTTTTTCAC CACCAAAGAG
GTGGGGAAGG GCACGGGCCT GGGCCTGGCC ACGGTCTATG GCATTGTCAG CCAGAACAAC
GGGTTTATAA ATGTTTACAG CGAGCCGGGC CAGGGCACCA CCTTTCGTAT CTACCTGCCC
CGCCACGGCG GGGCCCTGTC CACCGCCCAT CAACCCGGAC CGGCCACGGC GCCCCGCGGC
ACCGGAGAAA CCATTCTGGT GGTGGAGGAC GAGGCCGCCA TTCTCAAGCT GACCCAGCGG
GTCCTGTCCG GGCTGGGTTA TACCGTTCTG ACCGCGGAGA CCCCGGCCCA GGCACTGAAG
CTGGCCATGG AACACAGTGA CCGGATCGAC CTGCTGATCA CGGATGTGAT CATGCCGGAG
ATGAACGGCC GGGACCTGGC CGACCGGCTG AACGCCCTGC AACCGGACCT CAAAATCCTC
TATATGTCAG GCTACACCGC CGATGTCATT GCCCACAGAG GCATACTGGA GCCCGGCGTC
CACTTTATTC AGAAACCCTT TTCCAACCAG GACCTGGCAA AAAAGGTAAA GGCCGTGCTG
GGAGGATAG
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| Protein sequence | MRSFFHHSSF RIHHSFKREN TMNILIVDDR EENRYLLERL LQGNGHTVRQ AANGAEAMEI
LTAGGIDLVI SDILMPVMDG FQLCRKVKTD ETLHAIPFIV YTATYTGPQD EAFALKIGAD
RFIQKPCEVD VLLSAINEVM AVGGGRVAEP VQEEEALKLY SERLIRKLEQ KMLQAEQELQ
ARQEAEQALR ESESRFRLLA ETAPVGIIIE DRDQNVLYVS PTCISLCGYA PEETPTMEAW
FSLVCPDETL RNRVRAEWAA AVETATKTGV EIQPMEFPVT CRDGTVRDIE FRMSATQDLD
FVVLSDVTSR RRAEQALRES ERKYRRLAEN TSDVVWTADM NLNTTYVSPS VERLVGEPVG
LHIQRTMEEK FPADSLNRLY AVFAKELENE KDPACDKNRS RLVEVQHFRA DSSTVWVSIN
ISFIRDTTGR PIGLQGITRD ITERKQAEQA LRESEERYRT ILENIEAGYY EVDLAGNFTF
FNQAMCQILG YAEDELLGMN NRSYMDDENA KKVFHTFNQV FTSGKTAKAF DWELIRKDNT
RCFVDTSIAL MRDAENNPVG FRGIARDISE WKQAEAERER LSTQLLQAQK MESVGRLAGG
VAHDFNNMLS VILGYTELAM HRVPPHDPLY EDLREILSAA KRSSEITRQL LAFARKQTSS
PKVIDLSDTV ENMLKMLRRL IGEDIDLAWN PGPGLWTVNM DPAQISQILA NLLVNARDAI
GGVGKVTIET GNVSFDQDYC EDHNEFLPGD YVVLAVSDDG CGMDRKTRDR LFEPFFTTKE
VGKGTGLGLA TVYGIVSQNN GFINVYSEPG QGTTFRIYLP RHGGALSTAH QPGPATAPRG
TGETILVVED EAAILKLTQR VLSGLGYTVL TAETPAQALK LAMEHSDRID LLITDVIMPE
MNGRDLADRL NALQPDLKIL YMSGYTADVI AHRGILEPGV HFIQKPFSNQ DLAKKVKAVL
GG
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