| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3256 |
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| Symbol | |
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| ID | 5696119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3908207 |
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| End bp | 3910615 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265876 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001531136 |
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| Protein GI | 158523266 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA CGCGAAAACG GCTTGTTTTT ATGATTCGGC TGCTGGTCAT CATCAGCCTT
TCCTACCTGA TGCTGCTGGC CCCCGGTGCC GGCGCCGCCA CCCCCTTGAT ATACGGCTTC
ATCGGCCTTT ACCTGTTTTC CAACCTGGTT ATCTCCCAGC TGCCGGCGCC CTTTTTTGAG
CGGCCCCTTC TTTTTTACGG CATTGTGCTG TTTGACAGCA TCATGGTGGT GGCCGGCATC
TATGTGGCCG GCATGGCCAG CACCGACCTT TACCTGATTT TTTTTCTGAT TGTCTGCCTG
GCCACCCTGG GTTCGGATTT AAGAAACCTC ATCATTGCCG GCTTTTTGTT CGTGTTTGTT
TATGGATGGC TGCTGTACCA GGAGGGGCTT CTGCAGGGGC CGGAGGCCGT CAGCTACACC
CTGCGGCTTC CCTTTATCCT GGTGATTACC CTGTTTCTGG GATACATCGT CGACTTGCAG
ACCAAGGACA GGGACCGGCA GCTCAAGGCG TCGGAGGCCC GCTACCGCAG CTTTATTGAA
AATCTTCCCG TGGGCAGCTA CCAGCGGACA ACAGGGGAAA ACAGCCGTTT TCTGATGATG
AACCGGGCGT TTTTGCGCAT GTTCGGTTTC AAGGGAAAAC CCGACGCATG GCAGCCGGCG
GCACTGCCCT ACGCGGACGC CGACCAGGAA AAAGAAATTG TTGCCACCCT TGAGGCCAAA
GGCAATGTGG ATGGTATGGC CGTGGATCTG CGTCGAAAAA ACGGGACGGT TTTTAACGCC
CGTGTCTGGG CACGGCGCTA CCGGATCGAC GCCGGGGAGA TCGTGGAGGG CATTGTTGTT
GATGAAACCG GCCTGCGGCA GGCGGAGGCG GCCCTGCGGG AGAGCGAGGA GCGGCTCAAG
GTGGCGGTGG CCGCCTCCTT TGATCTGATC TACGAGTGGC AGGTGGGCGG CGACCGCCTG
CAATGGTTTG GCGACATTGA GCAGAAACTG GGCTATGGCC CCGGAGAGGC GGGCGATACG
CTGGCGGCAT GGGAGGTCCT GATTCACCCG GAGGATCTGC AGAATTTCCG CGAGATGGTG
GAACTGCGCG ATTCCAACAC ACAACCGCTT TTAAGGGAAT ACCGGATACG GCATAAAAGC
GGAGAGTGGC GGTACTGGAG TGATCACAGC GTTCCCCTGC TGAACGGAGA GGGCCGGCCC
TGGAAGTGGA TCGGGGCCTG CACGGATGTC ACCCGGCATA AAGCCATGGA GGCCCAGCTT
CAGCAGGCCC AGAAAATGGA GGCCATCGGT GTGCTGGCCG GGGGCGTGGC CCACAATTTT
AACAACATTC TGATGAGCAT ACAGGGATAT GTGTCTGCCA TGCTGATGGA CCGGCAGCCC
CAGGATTCCG ACTACGAGCA CCTGGTCGAT ATCGACCGGT CGGTGAAAAA GGCCAGCACC
CTGACCCGCA ATCTTCTGGG ATATGCCCGT GGCGGCACTT ATGATGTGCA ACCCACCGAC
TTAAACGAGT TGATGCGGAA CGAAGACAGA ATGTTCGGCA GCGCCAAGAA GGAGATCGTG
CTGGACGAAC ACTTCCAGAA GGATATCTGG CCGGTGGATG TGGACCAGAG CCAGATGCAG
CAGGTGCTGA TGAATCTTTA CATCAATGCC GTTCAGGCCA TGCCGGAAAC AGGCGGCACC
CTTCATGTGG GCACGGAAAA TGTCATACTC AATGAAGAGG ATGTCCGGGG ACATGACGTG
CTGCCCGGAC CTTATGTAAA AGTGGTGGTG CAAGATGAGG GGTGTGGCAT GGACAAGGCC
ACCATGGAAA AGATTTTTGA TCCCTTTTTT ACCACCAAGA AGACCGGGGT GGGCACCGGC
CTGGGGCTTT CATCGGTCTA CGGCATTGTA AAGAGCCATG GCGGCATGGT CCGCGTCACC
AGCGAAAAAG GGCGGGGCAC CTCGTTTTTT ATTTTCCTTC CGGCCATGAT CCGGGGGCAG
TTGAAAAAAG AAAAAGAGGC GGCCGCGCCG GCCATAAAGG GCGGGGCAGA GGCCATTCTT
GTGGTGGATG ACGAAGAGAT GGTGATCAAG GCCTGTTCAC GCATGCTCAA AAGGCTGGGA
TATAATGTGG TGGCGGTCCA GAGTGGTGAG GCGGCGGTGT CCCTCTACCG GCAGCATTAC
AGGGAAATTG CCCTGGTCCT GCTGGATATG CTGATGCCGG GCATGGGCGG CGGCGAAACA
TATGATAAGC TGAAGCAGAT CAATCCCCAT GTAAAGGTGC TGCTGTCCAG CGGGTTCAGC
CTGAACAATC AGGCCCGGGA GATTCTTGCC AAAGGGTGCA GCGGGTTTAT TCAGAAACCC
TATGATACGG CCGCGATCTC TTTAAAACTG CGTGAAATCC TGGATCAACA GGAGGCCGCC
GAAACCTGA
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| Protein sequence | MDLTRKRLVF MIRLLVIISL SYLMLLAPGA GAATPLIYGF IGLYLFSNLV ISQLPAPFFE
RPLLFYGIVL FDSIMVVAGI YVAGMASTDL YLIFFLIVCL ATLGSDLRNL IIAGFLFVFV
YGWLLYQEGL LQGPEAVSYT LRLPFILVIT LFLGYIVDLQ TKDRDRQLKA SEARYRSFIE
NLPVGSYQRT TGENSRFLMM NRAFLRMFGF KGKPDAWQPA ALPYADADQE KEIVATLEAK
GNVDGMAVDL RRKNGTVFNA RVWARRYRID AGEIVEGIVV DETGLRQAEA ALRESEERLK
VAVAASFDLI YEWQVGGDRL QWFGDIEQKL GYGPGEAGDT LAAWEVLIHP EDLQNFREMV
ELRDSNTQPL LREYRIRHKS GEWRYWSDHS VPLLNGEGRP WKWIGACTDV TRHKAMEAQL
QQAQKMEAIG VLAGGVAHNF NNILMSIQGY VSAMLMDRQP QDSDYEHLVD IDRSVKKAST
LTRNLLGYAR GGTYDVQPTD LNELMRNEDR MFGSAKKEIV LDEHFQKDIW PVDVDQSQMQ
QVLMNLYINA VQAMPETGGT LHVGTENVIL NEEDVRGHDV LPGPYVKVVV QDEGCGMDKA
TMEKIFDPFF TTKKTGVGTG LGLSSVYGIV KSHGGMVRVT SEKGRGTSFF IFLPAMIRGQ
LKKEKEAAAP AIKGGAEAIL VVDDEEMVIK ACSRMLKRLG YNVVAVQSGE AAVSLYRQHY
REIALVLLDM LMPGMGGGET YDKLKQINPH VKVLLSSGFS LNNQAREILA KGCSGFIQKP
YDTAAISLKL REILDQQEAA ET
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