| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3233 |
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| Symbol | |
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| ID | 5696096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3876779 |
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| End bp | 3877813 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641265853 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001531113 |
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| Protein GI | 158523243 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000188784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGGC GTTTAACAAA ATATTCAGGC CGGTGGATGC TGGCCGCGGC CTGCCTCTGC
CTGGCTTTTG CCGGGTGCGA CGGCTCACGG CACAAGACCT TTTCCGGAAA AACCATGGGC
ACCGAGTACC ATGTCACGGT GGTGACCGGA ATGCTGTCAC GCACCGCGCC CCTGCAAAAG
AAGGTCGAGG CCCGGCTGGC CCACATCAAC GCCGGTATGT CCACGTATAT GGACACCAGT
GAGATTTCCC GGTTTAACAA CGAGATCGGC CAGGACCAGC CCTTTGCCGT GTCCAAAGAT
TTTTTGCGGG TGGCTGCCGA AGGCATGGCC CTGTTTCGGC TGACCGATGG GGCCTGGGAC
GGGTCGGTGT GGCCCCTGAT GATCCTGTGG GGGTTTGACC GGCCGGAGCA GCAGCGTTTT
GTACCGGATT CGGCCGAAAT CGACCAGGTG CTGACCTGCG TGGGATACGA TTCGCTTCAG
ATTGATGAGG CAAACCGCCT GGTGAAAAAA ACGCCCTGCC TGTTTCTGGA CTTTGCCTCC
ATTGCCAAGG GGTATGGCGT GGATGTCGTG GCCGAGGTGC TTCGGGAGGC CGGTGTCGAC
AATTTTATCG TGGAAGTCGG GGGCGAAGTG TATGCCGCCG GTGTACGGGA AACCGGGGAT
CCCTGGCGTA TCGGCATCAA CACGCCTGAA CCGGGTGCGC CGGTGGACCG GGTGCGCCAG
GTGGTGGCCC TGTCCGACCG GGCCATGGCC ACCAGTGGTG ACTACCGGAA CTATTTTGTG
ATCGACGATC GGACCTACAG CCATGTGCTG GACCCCCGGA CCGGTTATCC CGTGGCCAAT
GGTGTGGTCA GCGCCACTGT GGTGGCCGAC ACCTGCACCT TTGCCGACGG ACTGGCCACA
GCCCTGATGG TGATGGGGGC CGAACCCGGA ACGGCCCTGG TAAACACCCT GGAAAACGTG
GAGAGCTGCA TCACGGTCCG CCGGACCGAC GGCACGTACG AGGATTTTTG GTCAACCGGA
TTTGTCGCGC AGTAA
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| Protein sequence | MMRRLTKYSG RWMLAAACLC LAFAGCDGSR HKTFSGKTMG TEYHVTVVTG MLSRTAPLQK
KVEARLAHIN AGMSTYMDTS EISRFNNEIG QDQPFAVSKD FLRVAAEGMA LFRLTDGAWD
GSVWPLMILW GFDRPEQQRF VPDSAEIDQV LTCVGYDSLQ IDEANRLVKK TPCLFLDFAS
IAKGYGVDVV AEVLREAGVD NFIVEVGGEV YAAGVRETGD PWRIGINTPE PGAPVDRVRQ
VVALSDRAMA TSGDYRNYFV IDDRTYSHVL DPRTGYPVAN GVVSATVVAD TCTFADGLAT
ALMVMGAEPG TALVNTLENV ESCITVRRTD GTYEDFWSTG FVAQ
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