Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3203 |
Symbol | |
ID | 5696065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3837422 |
End bp | 3838609 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641265822 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001531083 |
Protein GI | 158523213 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGGAT TTGAAATTTT CGGCGACGAG GAGAGGAAAG AGGTAAACGA CGTGCTGTCC ACCGGCGTGC TGTTCCGGTA CGGCTTTGAC GCGGCCCGAA ACGGTCACTG GAAGGCGAAA ACCTTTGAAA AGGAGCTGTG TGAGCGCACC GGCGCCGGGT TTGCCCTGCT CTGCTCCAGC GGCACCGCGG CCCTTTCCGT GGCCATGGCC GCCTGCGGCG TGGGCGCCGG TGATGAAGTG ATCATACCGC CCTTCACCTT TGTGGCCTCC TTCGAGGCGG TGCTCAATGC CGGGGCCATT CCGGTGTTCG CGGAGATCGA CGAGACCCTC TGCCTGGACC CGGAGGCCGT TGAAAAGGCC ATCACCCCCC GCACAAAGGC GGTGATGCCG GTACACATGT GCGGCAGCAT GGCGCAAATC GACGCGCTCA AGGAGTTGTG CGACCGAAAA GGGCTGGTCC TGCTCGAAGA TGCCTGCCAG TCCATCGGCG CCACCTTCGG CGGCAAAAGC CTGGGCCGGT TCGGAAAAGC CGGGTGTTTC TCTTTTGACC CGGTCAAAAC CATCACCTGC GGAGAGGGCG GCGGCATGAT CACCGACGAC CGGGACTGCT ACGTGAAGGC CGACGCCTAT GCCGACCACG GCCATGACCA CATCGGCAAC GACCGGGGCA AGGAGGACCA TATCGTGCTG GGCGCCAACT ACCGCATCAG CGAGCTCAAC GCCGCCGTGG GCGTGGCCCA GCTGCGCAAG CTGGACCATA TTCTTGCCGT CCAGCGGGCC AACAAAAATG CGATCAAATC GGCCATGGCC GAATTTACAA AAATCTCCTT CCGGCATATT CCCGACCCGG CAGGCGACTC AGCCACCTTT CTCTCCTTTT TCCTGCCCGA TGAAGCACAG ACCCGGCAGG CGGCCAAAGA CCTGGCCGAT GCCGGCGTGG ACGGCTGTTT CTACTGGTAT GCCAACAACT GGCACTACAT CCGCCAGTGG CACCACCTGA AAAAGATGGT GGCAGCGGCC CGGGTGCCGG CCTCCCTGGC CGATAACTTT CCCGACTATT CAACGGTGGA CATGCCCCGT TCCGACACCA TCATGTCCCG GTGCATCTCC ATGCAGATCA AGCTGTCCTG GAGCCCGGAC CAGCTGGCCG ACAGGATTGA AAAAATAAGA ACCCTCTTTT CAAAGTAA
|
Protein sequence | MPGFEIFGDE ERKEVNDVLS TGVLFRYGFD AARNGHWKAK TFEKELCERT GAGFALLCSS GTAALSVAMA ACGVGAGDEV IIPPFTFVAS FEAVLNAGAI PVFAEIDETL CLDPEAVEKA ITPRTKAVMP VHMCGSMAQI DALKELCDRK GLVLLEDACQ SIGATFGGKS LGRFGKAGCF SFDPVKTITC GEGGGMITDD RDCYVKADAY ADHGHDHIGN DRGKEDHIVL GANYRISELN AAVGVAQLRK LDHILAVQRA NKNAIKSAMA EFTKISFRHI PDPAGDSATF LSFFLPDEAQ TRQAAKDLAD AGVDGCFYWY ANNWHYIRQW HHLKKMVAAA RVPASLADNF PDYSTVDMPR SDTIMSRCIS MQIKLSWSPD QLADRIEKIR TLFSK
|
| |