Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_3132 |
Symbol | |
ID | 5695992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3759538 |
End bp | 3760434 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641265749 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001531012 |
Protein GI | 158523142 |
COG category | [C] Energy production and conversion |
COG ID | [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00229195 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCAT CATCAAAGGA TATTTTAAAA CGCCATGGCT GGCGCCTTGA CCGGGCAGTC CACAATTTTG TCTATTTTTA TTTTCACAAG CAATATGTTT TCGTGGCAAG ATGGCTCACC AGAATCACGG TGATGCTTTT TTCCTGGCTG AAACCGATGA AAGCCATACC GGAATTCGTG TATAACCGAT ATCATTCCAA GGTATTGTCC GTCAGCGATG TTACCAAAAT ACTGTCTCTG GAAAAAAGCC TGGATATCGG GGTCGATAAG AACAAACGGG TTCTGCCGTT CAAGTACGCC AACAAAATTT TTATTCGCAA CCCCAAGCTA ATCGCGGTGA TGGACTGCCC CTGCGCCCTG AACCAGAAGG AATCCGAACG GTGTCATCCG GTGAAAAAGT GCATTGCCGT AGGCCAGGAC TTCGCGCCCA TCTGGCTGGA CCACTGCAAA GAGAAATATC ACGCCACCCA GATTACCCAG GCAGAGGCCC TGGAGATCAT CAAAGAGGCG CGCAAAACAG GGCATGTGAC CAACGCTTTT TTGAAGGTTG CCACCGGCGG CATTACCGGC ATCATCTGCA ACTGCTGCCC CAAATGCTGT GTTGAGCTTG AATCGACCCG GCTGTCTCAA AAAATTGATC CGTCCGTATC GCAATACGCG CCGTCCGGCT ATTCGGTCAG GCACGACCCC GCCGCCTGCA CCCTGTGCGG TGCCTGCGAG GCCGTCTGCC CGTTTGACGC CATAAAAATT ACGGATGATC GATTGGTCTA TGATATCGGC GCCTGCATGG GCTGCGAACT GTGCGTGGAA AACTGCCCCG ACAATGCGTT GACGCTCTAC AACGACCCGG ACAAACTGCT CCCCCTGGAC ATTGAACTGT TGAAAACCGA ACTTTGA
|
Protein sequence | MKPSSKDILK RHGWRLDRAV HNFVYFYFHK QYVFVARWLT RITVMLFSWL KPMKAIPEFV YNRYHSKVLS VSDVTKILSL EKSLDIGVDK NKRVLPFKYA NKIFIRNPKL IAVMDCPCAL NQKESERCHP VKKCIAVGQD FAPIWLDHCK EKYHATQITQ AEALEIIKEA RKTGHVTNAF LKVATGGITG IICNCCPKCC VELESTRLSQ KIDPSVSQYA PSGYSVRHDP AACTLCGACE AVCPFDAIKI TDDRLVYDIG ACMGCELCVE NCPDNALTLY NDPDKLLPLD IELLKTEL
|
| |