Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2988 |
Symbol | |
ID | 5695847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3587900 |
End bp | 3588721 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641265604 |
Product | CRISPR-associated Cse3 family protein |
Protein accession | YP_001530868 |
Protein GI | 158522998 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG TGCTTGCGGA CAGTGTCTAT AACATCCATC GGCTGCTTTG GGACCTTTTC CCCGGACAAA AACAAAGAAA CTTTCTGTAC CGGGAGGAGA TCGCCAGAGA ACAGCTCGGG TATCAAGGAG GCGCCCGTGG GGAATCTCTT TATTACCTTG TGTCTTCATC GGCACCTTCT TCTCAATCCC CGTTTTTTGC AGTAGAAACC CGGCGGTATG AACCCCAGTT GCAGCCGGAC GAAGCCCTGC GTTTTGAGCT GCGTGCCAAT CCGGTCGTGA CTAAAAACGG TAAAAAACAT GATGTTGTCA TGGATGCCCA GCAAACTTTT TTAAAACTGT TATGCGAAGA GCTGGGGCTT CTGTCACACC TGCAAGGTAC GCCTGAAAAA AAAGAGTATA AAAATGTTCT CCTTACACAT GGAGGGCAAC GCTTGGACAG CCGGTTGACC GATTTGTTAG ACGGAGATTA TCGATATGCC GAGCGCCTGG ACCAGAAGCT TACCCCGCGC GAAAAGTTGG AATGGGCACT GAGAGCCGAA ATCGATAACA CGCTTGACGA GTGGATGGCA AAGCAGGGCA AACAAAATGG ATTTACGATT GTAAAGGATA CTCATGGGAA TCTGAAACTT CAGAACAGTG CCTACCAATG GCATGCATTA ACAGGAAAAG CCGCCAAAGG GAAGAAGTCC GGCTTCAGCG CCGTGGACTT TACTGGTGAT TTGGTGGTCT CTGATGTTGA GGCATTCAAG AAGTCACTTT TTAACGGTAT CGGACGATCT AAAGCCTTTG GCTGTGGGCT GATGTTGGTG AAACGGATTT GA
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Protein sequence | MAKVLADSVY NIHRLLWDLF PGQKQRNFLY REEIAREQLG YQGGARGESL YYLVSSSAPS SQSPFFAVET RRYEPQLQPD EALRFELRAN PVVTKNGKKH DVVMDAQQTF LKLLCEELGL LSHLQGTPEK KEYKNVLLTH GGQRLDSRLT DLLDGDYRYA ERLDQKLTPR EKLEWALRAE IDNTLDEWMA KQGKQNGFTI VKDTHGNLKL QNSAYQWHAL TGKAAKGKKS GFSAVDFTGD LVVSDVEAFK KSLFNGIGRS KAFGCGLMLV KRI
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