| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2930 |
|---|
| Symbol | |
|---|
| ID | 5695789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3518996 |
|---|
| End bp | 3524890 |
|---|
| Gene Length | 5895 bp |
|---|
| Protein Length | 1964 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641265546 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001530810 |
|---|
| Protein GI | 158522940 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGTT TATCTTTTCA TAGAATATTA AAAACGATGA GTGGAGGTTA TATGAAATAT
CTCCGGCCCC AAGATGGAAT ATCAATCGAA ATGATTTTGA AGGTCATGGG ACTTGATAAA
AATAATGAGC TTAGAGAAGC GATTCTCCAC CAACTTGCTG ACAACTTGAG CGACAATCAA
TCGGAATCAG GTAAAAAGTT TCGCTGCCTT CTAAATTCCC TCAAGATAGA TGGTTACAGA
CAAGGGAAAG CTCCTGTGCG AGCTGTTATC AACCTGATAA GTAAAATTCA TTACTGGCAG
AACGAAGAAA TTTTTTTAAC GATTATGGAA TTTTGGGTAG ATTTACACCA GCCTCAAATC
GATCAAGCAA ATGCTTTTTA CAATAAAATC AAACCGGATC AATGCAGTTT AATATTAGAA
GCCATGATAA AAGGCGACCG GCCTGAAGCT TTTATCGCAC TTGTGAATGA CTTCAGGATA
ATGCATAAAT GCTCTTCCGA AGAATTTGTG GAGTTACTGC TTTGTACTGT TTTTTTATTT
AATAACATTG AGAGTGAATA CATTGGAAAT TCGGATGATA ATGAGACCGA ACCCAACCAT
ATAGGCCTGC CTAATTTCTG GGCGAACATT ATAGATAGAT TAAATGAATT ACCACCTGAC
TCAGATGAAT GGAACGCTCT AGACAACTTT ATAAGTACCG CTAAAGAAAT TCTGAGTTTA
AAAACAGAGC ACCATGGGGC AACTATCGAA CAACTTAATG AAGCGCTGGT AGAGTTTACA
AGTAATTGCG AGCAAGGCCT TGCTTATATC GGAAGAGCCG ATGCTGCGAA TCAATGGGAA
GCTTCTGTAT GCGAGCAGGA GAATATTGAT AAAATTATTG AACTAATGAG AAGCTTGCGC
GAAGAACTTA CACAAATTAT GGAGCCGTGG CCTACAACTT TTGCCGACCT GAAAGAAGAG
AAGCTTGCCC GGGGAAACAG AGATAAATTA CAAAACAGCA TAGATGAACA TTTTGGCATT
ATAGACAGGA CATTAAGAAA AACATCAGTC ACCGATATAA CTACTGATAA AGATAGTAAA
GCCTCTGTTG ATGATGAAGT AGAGGGGCCA GATATCATAG ATGGGAATTC CGACCTTACA
AATGAAGAGG TATTTGAGGA GGTAGTGGCT TTAGCCCCTC CCTTAGCAGA GCTTGAAGAT
GAAGAGCCAA TCGAAGAGCA GGGGGGCAAA CTCGATCTTG AAGATGGCCT CGAAGACGAT
GAGTTGATCG GGCAAGATGA AGAGAATGAA GAGAATGTAG AAACTGACAT TGAAAGTGGG
TCTGATGAGA TTAACGAAGA ACCAGTACAG AAAAATGAAA ATTGTGCGGA GTCCAGACCC
TTCTGGGAAA TTGCTGCACA ACTCCAGTCT CAAGATAGCA GTAAATTTAA CGCAGGTCTT
ACAGAGCTGC TGTGGGCAGA GATTAAAGAA AACAGGCTAT CCCCAGCATA TTGGATAGCA
CGATATCTTG AATCAAATGA TCATGATGAA AAAATAAAAG TTGTTCCGTC TTGGTTAATT
GAGTTTATCT CCCTATCTCG ATATCTCAGA CACGGTTTCG GCCCAATAGC CCCTAGGCTG
GAACAATTAG CCCAGAATTT TGATGAATCA ATTTTCAAAG GCCCTGATGA TTGGAAAAAC
GGGATGCGAT TTTTAATTGC CGGCGCCATG TTAAGGCCAG CAATGATTGC TCCTGCTACA
GGGGCTGCCG CATTATTGAA AAGCATTCGA TTCAAGGGCG AACGGCCTCA TACATATCAG
ATCTGGCAGG ATATTATTGA ATTTGGGAAT TTAGGGCACC CACTAAGTCT TTCAAATCTG
GGCCTCATTG ATAATCAAGC GGCCCGAAAG AAACAGCTTG ATAACTTAAT TGATGATGCT
TCGCAATGGT ATGACCAGGC AGCGAGAAGG GTGATGATGT ATCAACCCGC AACCCAAGTG
TGGATCGCAT GGCAGAAGTC TGACGGACTA ATATCACAGA TTATTAAACC GGTTTGCGAA
AACGATCTTT CTCAAATAGA AAATGTCAGG CGACTATTAA TTCAAAATTC AAACGAGCAG
GCCCTTAAAC TCCAAATCAA TGAAACGAAC AAAGCTGTCA GAAAAACTCG AGTGAAAAAA
GAGATTACCG GGAGAGGATT AACACAACTT ATTAGCCATG CAAGTGACGC TTTCGGTTAC
GCAAGGCAAT GGCTTACACT TAATGACGAG CAACAGGGCA AAAATCAGGA TTGGTTTACA
GAACAAGTTG ATAAGCTTAA AAAGACCTTT GAACGTCACA GTTCAAGGGC TATTGGGGAA
TTAGAAAATT ATGAAAAAAA CTATAATAAC TCTCTTTATA TGACTAGTGG AATCAGTGTT
TTCAAATCTG CCATTTTACA CGTTCAAGCC TTCTTTGATG GGAAAAAATC TTTGGATATG
GACGAGGAGG TTACAACAGC ATTAATATTA AATCATGATT TGCTTCGCAT GCCTTCAGTT
CGACTGGACG AATACTTTGA CCCAATAAAT TTTAATTCAC CAAAAGAAAT AATATCTGAA
ATTGTGGAAA TGGAGAAAAA AAATGAAACG GATTGGGAGG ATATTTTCTC CTACTGTTGC
GAAAAAGGGG AACATGATAG AACCCTTTTA ATTCTTAAAT ATGACAAATC AATTTTAAAG
AAATTAGATA ATGATGCCTT GGATGAGAAA AGAAATGAAT CAATTGAAGA ACACAGATTA
AAGCTAAAAG ACAAAATCGC TTATACTGAA AAGCTGATTG GCGAAGCGGT GGCTCAGAAC
CTGTTAACCG AAGATCAATA TGCAGAAGCG AGATCGCAAA TTGAACTGAT TGACATAGAA
GGCATAACCT TCTTTCCTGA AATTTATTCG AGACTCACCA AAGTACAACT ACAACTTGAT
GAATATAAAA AGGGAAAGAC AAAAAGCATT ATAGATAAAC TAAAAAGGAG TAGTTTAGAT
GAAACCAGTT CTTCGATAAT AAAAAAGTTG ATAGATGGTG GAGATCTTGG CACTGCCGAA
GAATTTCTTG AAATGGCGGA ATCAGGCGAA GCTCTTCCAG ACCATGATGC AGGGACAGAT
GACCCTTTCT GTATATTTTT CCCTAAGTTT ATCAATGAGT TTGGGCAGTG GATGGAGGAT
AAAGGTCAAC CCAAAAAAAT TATAAGCAAT ATTGATAGAG GTCAATCCTT CGGCCCAGTA
AAACTTAGTG TTATTCGGGG GGCTCAATTG AGCCAAGCCT CTGATTCTGT GCGAATATGG
TTGGATGGCA AAAGAACAAA AAAAATAAAT CGGTACGATA TCAAAATCGT TCTTACCTGG
CTTGGCTTCA ATATTCTAAA CGTCGTAGAC AGTGACAAAT CTTCTTCTGA TCGGCAATGG
TTCAAAGTCA AGATGGAAAC CATTCGTGAT GGTTGCCCTA TTTCGGCTTA TGGTTCCGAT
GCCAAAGGTA ATTTTCGGCT ACTTTGTGTT CATGGGCGTC CCCCCGAGGA TCAGGTCGTT
CAACAAGTTG CCATAAAAAG TGAAGACGGC CCGTGTATTG TTTTTTATTT CGGCAGAATG
ACGGAAAGGC AATTCAGAGA TCTGTCTTTG TCTGCCCGAA AACACAACTC CGACGCACTG
TTCATAGACG AATCCGGATT TTTTTTCATG CTTGGGCAAA GAGGTGCTAA ATTAGAGACT
CTTTTTCAGA TTACCTTACC ATTCACAGCC CATAATCCCT ACAAACCTTT TGCAACTGGA
AATATTCCGC CGGAAATGTT TTACGGTCGT TCAAATGAAA TGCAGAGCAT TATGGATCCA
CATGGGGCCT GTTTTATATA TGGCGGACGT CAATTGGGGA AATCAGCACT GCTTCGTGCC
GTAGAAAGAA AATTTTACCG GCCGCAAAGC TCTCACTTTG CTTTTTTTCT GGATCTAAAA
GTTGAAGGGT TAGGTGAAAG TCGTCCGATA GATGATATTT GGCAGATGCT TCACCGGCAA
TTAGTAAGAT TGGGGATTTT GCAGTCCCAA TACAACAGGA AGACGAGTCC CGACGGGCTA
ATCGAGGAGC TTATTGGTTG GGCCGAAAGT GATGACCAAA AGCGACTGCT TGTCCTTCTA
GATGAAGCAG ACCACCTGCT TGATGAAGAT GCCAAAAAGA ATTTCCCAAT ATTTACCTTC
ATTAAGAAAA TAATGGATTA CACAACCAGG AGGGTTAAAT TTATATTTGC AGGCCTTCAC
AATGTGCAAC GTTTTAGCAG GATTCCAAAT CAACCATTGG CTCATTTAGG TGCGCCTATA
TGTATTGGGC CTTTACTGAA TAATGGCGAA TGGCGAGAAG CCACAAACTT GATAGCGCGG
CCTTTAAATG CACTTGGCTA CAGATTTGAA CCGCATTTCC TGGTTAATCG AATTTTGGGG
CATACCAATT ATCAACCTAG TCTTATCCAG CTTTTTTGCG AATCATTAGT AAAATATCTT
TCAAACCCAG CTGCTGCCAA ATTTGATCAA AAACTCTCAC CACCATTCAT AATAACCGAA
AAGCATGTGG ATGATGTTTA TCTGAATACG CAATTGAGAA AAACAATCAA GGAGCGATTT
GAACTGACCT TAAATCTTGA TCCCCGATAC CGATTTATTG CTTTCGTTAT TGCTAATGGG
ACTATTGATA GAGATGACCC TTCCGGTAGA GGTTTCAGCG TTCCCTGGGT AACCCAAGAA
GTCAATCACT GGTGGCCCAG AGGGTTTGCA GACAGCAGTG GGATTGACGA TATCCGGGGG
TTGCTAGATG AAATGACTGG TTTGGGCGTA CTATCCAAAA CCAAAGATGA GAGGTATCGT
CTTAGAAGTT CTAATGTCCT CCGTTTGTTA GGCAACCAAG AGGATATTGA GCATACCCTT
CTATCTTCAG ATTCATGGGA ATTGCCTCAG AAGTTCCACA CCAGTATTTA TAGGCGGGCG
GGAAAAGGGA AAAATACGAT AAGAAGAAGC CCAGTAACCG GAGACCAGGA ATCTGATCTA
TTATACAGAG AGAATGGTAT TCGCCTTGTT TTTGGGAGCA GGGCCTTGGG GGTCGAAGAC
CTGCAAGAGT ATATTGAAAT TGCGAGACCG GACTCACCAA CAGGTGCCAT ATCGGCCTCA
ATGCCTGTAA CCATTAAGGA CGTTAACGAA TTTTTAACAC GACTTTCCCG CGTTCTTAAC
GACAAAAAGA ATGGCCTTAA CCTGATTTTT ATCCCACCGG GGACACCTTT TAGCGAATTG
TGGGTTAATG AAGCAGCCAG AAAATTAAAT GCGTTGAGAT CGTCGACTGC CATATGCCGG
CTTTTCTTCA TTTTTGACCC CGATTCATTG CTTGCCTGGC TAAAAATATC TAAAGCGAAC
AGGCCTGAGA ACAAACTAAA TAATGTACAG ATCACTTCAC TTAAACGCTG GTCAGAATCG
ACAGTTGAAA GATGGCTAAA CGAACTTGCT TTAGCGCCAA ACAACCCGAC GCAGCGTGAA
ATCATTATGT CCCAAACTGG TGGATGGCCA ATGCTTCTTT ATCGGTTTGC AGAACTCAAT
CTTCAACGTA ACGTGGCATG GGAAAAAGCT TTAGATGAAG TATCCAGTAC ACTTGAGCAG
GAGGACGAAA GGGGGAAATT TTTAAATTCC GTTGGTCTGA GTAAAGGTAC TATTCAGTAT
AAATTCATGA AAAACTGGGC TGAAATCAAA GAGCCATTAG CACCAGAAGA CATAATTGGT
CTTTTCGACG GATTCGATGA AGATCAGGCT GACTGTTTGC TGTCCTACGG TGAACATTTA
AGTATCTGCA AACCAGCAAA GGGAAACAAA TGGCAACAGG AAGCTTTATT GGCAAAACTC
TTACGTTTAG AATAG
|
|---|
| Protein sequence | MKCLSFHRIL KTMSGGYMKY LRPQDGISIE MILKVMGLDK NNELREAILH QLADNLSDNQ
SESGKKFRCL LNSLKIDGYR QGKAPVRAVI NLISKIHYWQ NEEIFLTIME FWVDLHQPQI
DQANAFYNKI KPDQCSLILE AMIKGDRPEA FIALVNDFRI MHKCSSEEFV ELLLCTVFLF
NNIESEYIGN SDDNETEPNH IGLPNFWANI IDRLNELPPD SDEWNALDNF ISTAKEILSL
KTEHHGATIE QLNEALVEFT SNCEQGLAYI GRADAANQWE ASVCEQENID KIIELMRSLR
EELTQIMEPW PTTFADLKEE KLARGNRDKL QNSIDEHFGI IDRTLRKTSV TDITTDKDSK
ASVDDEVEGP DIIDGNSDLT NEEVFEEVVA LAPPLAELED EEPIEEQGGK LDLEDGLEDD
ELIGQDEENE ENVETDIESG SDEINEEPVQ KNENCAESRP FWEIAAQLQS QDSSKFNAGL
TELLWAEIKE NRLSPAYWIA RYLESNDHDE KIKVVPSWLI EFISLSRYLR HGFGPIAPRL
EQLAQNFDES IFKGPDDWKN GMRFLIAGAM LRPAMIAPAT GAAALLKSIR FKGERPHTYQ
IWQDIIEFGN LGHPLSLSNL GLIDNQAARK KQLDNLIDDA SQWYDQAARR VMMYQPATQV
WIAWQKSDGL ISQIIKPVCE NDLSQIENVR RLLIQNSNEQ ALKLQINETN KAVRKTRVKK
EITGRGLTQL ISHASDAFGY ARQWLTLNDE QQGKNQDWFT EQVDKLKKTF ERHSSRAIGE
LENYEKNYNN SLYMTSGISV FKSAILHVQA FFDGKKSLDM DEEVTTALIL NHDLLRMPSV
RLDEYFDPIN FNSPKEIISE IVEMEKKNET DWEDIFSYCC EKGEHDRTLL ILKYDKSILK
KLDNDALDEK RNESIEEHRL KLKDKIAYTE KLIGEAVAQN LLTEDQYAEA RSQIELIDIE
GITFFPEIYS RLTKVQLQLD EYKKGKTKSI IDKLKRSSLD ETSSSIIKKL IDGGDLGTAE
EFLEMAESGE ALPDHDAGTD DPFCIFFPKF INEFGQWMED KGQPKKIISN IDRGQSFGPV
KLSVIRGAQL SQASDSVRIW LDGKRTKKIN RYDIKIVLTW LGFNILNVVD SDKSSSDRQW
FKVKMETIRD GCPISAYGSD AKGNFRLLCV HGRPPEDQVV QQVAIKSEDG PCIVFYFGRM
TERQFRDLSL SARKHNSDAL FIDESGFFFM LGQRGAKLET LFQITLPFTA HNPYKPFATG
NIPPEMFYGR SNEMQSIMDP HGACFIYGGR QLGKSALLRA VERKFYRPQS SHFAFFLDLK
VEGLGESRPI DDIWQMLHRQ LVRLGILQSQ YNRKTSPDGL IEELIGWAES DDQKRLLVLL
DEADHLLDED AKKNFPIFTF IKKIMDYTTR RVKFIFAGLH NVQRFSRIPN QPLAHLGAPI
CIGPLLNNGE WREATNLIAR PLNALGYRFE PHFLVNRILG HTNYQPSLIQ LFCESLVKYL
SNPAAAKFDQ KLSPPFIITE KHVDDVYLNT QLRKTIKERF ELTLNLDPRY RFIAFVIANG
TIDRDDPSGR GFSVPWVTQE VNHWWPRGFA DSSGIDDIRG LLDEMTGLGV LSKTKDERYR
LRSSNVLRLL GNQEDIEHTL LSSDSWELPQ KFHTSIYRRA GKGKNTIRRS PVTGDQESDL
LYRENGIRLV FGSRALGVED LQEYIEIARP DSPTGAISAS MPVTIKDVNE FLTRLSRVLN
DKKNGLNLIF IPPGTPFSEL WVNEAARKLN ALRSSTAICR LFFIFDPDSL LAWLKISKAN
RPENKLNNVQ ITSLKRWSES TVERWLNELA LAPNNPTQRE IIMSQTGGWP MLLYRFAELN
LQRNVAWEKA LDEVSSTLEQ EDERGKFLNS VGLSKGTIQY KFMKNWAEIK EPLAPEDIIG
LFDGFDEDQA DCLLSYGEHL SICKPAKGNK WQQEALLAKL LRLE
|
|---|
| |