Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2836 |
Symbol | |
ID | 5695694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3417413 |
End bp | 3419170 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641265451 |
Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
Protein accession | YP_001530716 |
Protein GI | 158522846 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.333651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTT TTCGATTAAA ACCACGACAC CGCAGCCTGC TGGGATACAT CAAGGGAAAC CGTTTCCGGC TTTACCTGGC CGTGGCCTGC ATGCTGCTGA CATCGGCTAC CACCGCGGCC CTTGCCTATC TCATCAAGCC GGCCATTGAT CAGATTTTTA TCACCAAGGA CGCCCAAATG CTTCGGCTGA TTCCGCTGGC GGTGGTGATT GTCTCCCTGC TGCGGGGCAC GGGCATGTAC GGCCAGGAGT TTTTCATGGG CCGGGTGGCC GAGGGCATCA TCAAAAATTT TCGGGACAAT CTTTATGCCC GGATATGTCA GCTCCCTCTG GCCTTTTTTC ACAAGGAGCG CACCGGGGTC CTGATGTCCC GCATCACCAA TGATGTGAAT CTCATCAAGA TCGTTGTCTC CAATGCCGTC ACCTCCATGG TACGCGACTT CTGCACGGTT TTTTTCCTGC TGGGGCTGAT CTTCTACCAG ATATGGGAGC TGGCCCTGGT GGCCTTCATC GTCCTGCCGG TGGCCTTCTA CCCGGTGGTG GCCATCGGCC GGAAGGTGCG GCGGGTCTCC ACCCGGAGCC AGGAGACCAT CGCCGACATG AACGCTTTTC TGCACGAGAC CTTTTCCGGC AACAAGATCG TCAAGGCCTT TGGCATGGAG GCCTACGAAG AGGCCCGGTT TTATGAAAAG TCCCGGTCGC TTTTTGTGAT TGAGATGAAA AGCATCATGG TGCGGGCACT GTCGTCTCCG CTCATGGAGT TCGTGGCCGG GGCGGGCATC GCCTTTGTCA TCTGGCTGGG CGGCTCCCGG GTCATCAGCG GGGTCTATAC CACCGGTACC TTTCTGTCGT TTCTGGCGGC GGTGATGCTG ATGTACGACC CGGTGAAAAA GATTTCCGGT TTAAATGCCC TGCTTCAGCA GGGGCTGGCC GCCGTGGACC GGGTCTACGA TATTTTAGAA ACCCGGTCCG ATATCGTTGA AGCGCCGGAC CCGGTGACGA TACAACGGGC CCCCCACACA GTGGCGTTTG AGAAGGTCTC GTTTGTCTAC GACACCGGCG GGCCGGTACT TACCGACATC AACCTGACGG TGGCGCCGGG CGAAGTGGTG GCCCTGGTGG GCGCCAGCGG CGGCGGCAAA ACCACCCTTG TCAACCTGAT TCCCCGGTTT TATGATGTGG CCTCCGGTCG CATTCTTATC GATGGCACGG ACATCCGCAA GGCATCCATC GCCTCGCTGC GGGAGCAGAT CGCCATTGTC ACCCAGGAGC CCATCCTGTT CAACGACACC GTGCGCAACA ACATCGCTTA CGGTAATCAG GATGCATCGG AGGCGGATAT CCTTCAGGCG GCAAAAGACG CCTATGCGTA TGACTTTGTC GTGGGGTTTC CCAAGGGGTT TGATACCATG ATCGGCGAGC TGGGAGCGCG TCTTTCAGGT GGGCAAAAGC AACGGCTCTG CATTGCCCGG GCCCTGCTCA AGGACGCGCC GGTCCTGATT TTGGATGAGG CCACTTCGGC CCTGGACAGT GAATCCGAGG CAGTGGTGCA GAAGGCTCTG GCCAACCTGA TGAAGGGCCG CACCACCTTT GTGATTGCTC ACCGGCTCTC CACGGTCCAC CATGCGGACC GGATCGTGGT GCTGTCGGAC GGCCGGATCA CCGAGCAGGG AAAGCACGAG GAGTTGCTGG CCCGAAAAGG GGATTATGCC CGGCTCTGCC AGATGCAACT CAGCAACGGC GGGCTTCAGG AAGAGTAG
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Protein sequence | MAIFRLKPRH RSLLGYIKGN RFRLYLAVAC MLLTSATTAA LAYLIKPAID QIFITKDAQM LRLIPLAVVI VSLLRGTGMY GQEFFMGRVA EGIIKNFRDN LYARICQLPL AFFHKERTGV LMSRITNDVN LIKIVVSNAV TSMVRDFCTV FFLLGLIFYQ IWELALVAFI VLPVAFYPVV AIGRKVRRVS TRSQETIADM NAFLHETFSG NKIVKAFGME AYEEARFYEK SRSLFVIEMK SIMVRALSSP LMEFVAGAGI AFVIWLGGSR VISGVYTTGT FLSFLAAVML MYDPVKKISG LNALLQQGLA AVDRVYDILE TRSDIVEAPD PVTIQRAPHT VAFEKVSFVY DTGGPVLTDI NLTVAPGEVV ALVGASGGGK TTLVNLIPRF YDVASGRILI DGTDIRKASI ASLREQIAIV TQEPILFNDT VRNNIAYGNQ DASEADILQA AKDAYAYDFV VGFPKGFDTM IGELGARLSG GQKQRLCIAR ALLKDAPVLI LDEATSALDS ESEAVVQKAL ANLMKGRTTF VIAHRLSTVH HADRIVVLSD GRITEQGKHE ELLARKGDYA RLCQMQLSNG GLQEE
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