| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2829 |
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| Symbol | |
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| ID | 5695687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3411360 |
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| End bp | 3412322 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641265444 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_001530709 |
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| Protein GI | 158522839 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00299909 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCATA GTTCTAAAAA ACTGGTTGTT TCACATGCGC CGTTCTGGCA TGACGGCAGC
AGCCTGTCGG CCCGGCACTA TAATATTCTG CTGGTGGCCC TGATTCCGGT GATCGCCGGC
ATCCTGACCT ATGGTGTGCC GGCCCTGGCC GTGGTCTGCC TCTCCGTGTC CACCGCCATA
CTCTGGGAGC TGCTGATTAA CAGGGTTTCC AAAACACCGG TTTCCGTGGG AGACGGCAAT
GCCGCCCTGG TGGGATTGCT TCTGGCCATG CTGCTGCCGG CCACCACGCC CTGGTGGATG
GTGATCACCG GCACTTTTGT GGCCATTGTC ATCGCCAAGC AGATTTTCGG CGGCCTGGGC
GCCAATCCTT TTAATCCTGC CCTCATCAGC CTGGCGATTC TGGGTGTTTC ATGGCCCGCT
TTCGTGGATT TTAATTACAT GCTGGCCGAC TACGAAACCG GCTTCAACAT GGTCTACCCG
ATGTGGTCGG CCAAGTATTT CGGTTCGGCC AGCGTGGCCG GGTTTACGCC CATGGACCTG
CTGATGGGCA AACAGGCCGG CGGCATCGGC GCCACTTTCG GCCTGGGCAT TCTCATCGGC
GGCATCTACC TGATGATAAG GGGCTATATC CGGTGGGAGA TTGCGGTCTC TTTTCTGGCC
GGTGTGTTTG TCACGGCCCT GGTGTTCAGC CTGGCCAAGC CCGTGGAGTA TGCGGGCCCG
GTCTTTCACC TGCTGACGGG CTACACGCTG ATCGGCGCTT TTTTTCTGGC CACAGAGGAC
TCCTCTTCAC CGGTTAATTT TGTACCCATG CTGATCTACG GCGCCGCCGG CGGTCTGCTG
ACCGTTCTGA TCAGAAACAT CGGCGTGCAT GTGGACGGTG TGGTGTTTGC CATTCTGGTG
ATCAACCTGA TCAATCCACT TGTTGATAAA ATCAGACCAA AAGCAATGGG GAAGGTAGCA
TAA
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| Protein sequence | MQHSSKKLVV SHAPFWHDGS SLSARHYNIL LVALIPVIAG ILTYGVPALA VVCLSVSTAI
LWELLINRVS KTPVSVGDGN AALVGLLLAM LLPATTPWWM VITGTFVAIV IAKQIFGGLG
ANPFNPALIS LAILGVSWPA FVDFNYMLAD YETGFNMVYP MWSAKYFGSA SVAGFTPMDL
LMGKQAGGIG ATFGLGILIG GIYLMIRGYI RWEIAVSFLA GVFVTALVFS LAKPVEYAGP
VFHLLTGYTL IGAFFLATED SSSPVNFVPM LIYGAAGGLL TVLIRNIGVH VDGVVFAILV
INLINPLVDK IRPKAMGKVA
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