Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2823 |
Symbol | |
ID | 5695681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3405389 |
End bp | 3406267 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641265438 |
Product | short chain dehydrogenase |
Protein accession | YP_001530703 |
Protein GI | 158522833 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00207351 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAAACTTTAC CGACAAAAAA TGCTTTATCA CCGGCGCGGC CAGTGGTATC GGCCGGTCCA CGGCCCTTGC CATGGCCCGG CGGGGAGCCC GCCTCTTTCT CACCGACATA AACGCGGAGC CCCTGGAGGC GGTGGTTAAG GAAATTGAGC AGGAAGGCGG CACCGTGGCC GCGTGGGAGG CCTTTGATAT CCGTGACCTT GACCGGGTGC GGGCCTTTTC AAACCGCATC CATCAGGCCC ACGGCGCCAT GGACATCGTG ATGAACGTGG CCGGCACCGC CATCTGGGGC ACGGTTGACC GGCTGAAGCA TATTCACTGG AAAACCATGA TCGATATCAA CCTCATGGGC CCCATTAATG TGATTGAGTG TATGGTGTCC GAGATGGTGC GGGCCGGGCA GGGAGGCCAT CTGGTCAACG TCTCTTCCGC CGCCGGCCTG ATCGCCCTTC CCTGGCATGC CGCTTACAGT GCCAGCAAGT TCGGCCTGCG AGGCCTTTCC GAGGTGCTGC GCTACGACCT GCGGCCGCAC CGCATCGGGG TCACCGTGGT CTGCCCCGGC GCGGTAAAAA CCCCGCTGGT GGGCACGGCC CAGATTCTGG GTGTGGACAA AAGTCACAAG GCAGCCCGAA AGATGATCCG GCGCTTTGAA AAGCATGCCG TTACCCCTGA AAAAGTGGCG GCCGATATTA TTCAGGGTAT TGAAAAAAAC CGGTACATGG TGATCACCTC TTTTGATATT CGAATGGCCT GGTGGGCAAA AAGACGATTT TTCTTTGCCT ATCACCTGGC CATGATTGTG ATCAGCCGGT TCTTCAGACG CATGGCCCGA AAGGCGGCGC CGGCGGCCTT AGACCGAGAT GCCACATGA
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Protein sequence | MKIKNFTDKK CFITGAASGI GRSTALAMAR RGARLFLTDI NAEPLEAVVK EIEQEGGTVA AWEAFDIRDL DRVRAFSNRI HQAHGAMDIV MNVAGTAIWG TVDRLKHIHW KTMIDINLMG PINVIECMVS EMVRAGQGGH LVNVSSAAGL IALPWHAAYS ASKFGLRGLS EVLRYDLRPH RIGVTVVCPG AVKTPLVGTA QILGVDKSHK AARKMIRRFE KHAVTPEKVA ADIIQGIEKN RYMVITSFDI RMAWWAKRRF FFAYHLAMIV ISRFFRRMAR KAAPAALDRD AT
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