Gene Dole_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2823 
Symbol 
ID5695681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3405389 
End bp3406267 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content58% 
IMG OID641265438 
Productshort chain dehydrogenase 
Protein accessionYP_001530703 
Protein GI158522833 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00207351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAAACTTTAC CGACAAAAAA TGCTTTATCA CCGGCGCGGC CAGTGGTATC 
GGCCGGTCCA CGGCCCTTGC CATGGCCCGG CGGGGAGCCC GCCTCTTTCT CACCGACATA
AACGCGGAGC CCCTGGAGGC GGTGGTTAAG GAAATTGAGC AGGAAGGCGG CACCGTGGCC
GCGTGGGAGG CCTTTGATAT CCGTGACCTT GACCGGGTGC GGGCCTTTTC AAACCGCATC
CATCAGGCCC ACGGCGCCAT GGACATCGTG ATGAACGTGG CCGGCACCGC CATCTGGGGC
ACGGTTGACC GGCTGAAGCA TATTCACTGG AAAACCATGA TCGATATCAA CCTCATGGGC
CCCATTAATG TGATTGAGTG TATGGTGTCC GAGATGGTGC GGGCCGGGCA GGGAGGCCAT
CTGGTCAACG TCTCTTCCGC CGCCGGCCTG ATCGCCCTTC CCTGGCATGC CGCTTACAGT
GCCAGCAAGT TCGGCCTGCG AGGCCTTTCC GAGGTGCTGC GCTACGACCT GCGGCCGCAC
CGCATCGGGG TCACCGTGGT CTGCCCCGGC GCGGTAAAAA CCCCGCTGGT GGGCACGGCC
CAGATTCTGG GTGTGGACAA AAGTCACAAG GCAGCCCGAA AGATGATCCG GCGCTTTGAA
AAGCATGCCG TTACCCCTGA AAAAGTGGCG GCCGATATTA TTCAGGGTAT TGAAAAAAAC
CGGTACATGG TGATCACCTC TTTTGATATT CGAATGGCCT GGTGGGCAAA AAGACGATTT
TTCTTTGCCT ATCACCTGGC CATGATTGTG ATCAGCCGGT TCTTCAGACG CATGGCCCGA
AAGGCGGCGC CGGCGGCCTT AGACCGAGAT GCCACATGA
 
Protein sequence
MKIKNFTDKK CFITGAASGI GRSTALAMAR RGARLFLTDI NAEPLEAVVK EIEQEGGTVA 
AWEAFDIRDL DRVRAFSNRI HQAHGAMDIV MNVAGTAIWG TVDRLKHIHW KTMIDINLMG
PINVIECMVS EMVRAGQGGH LVNVSSAAGL IALPWHAAYS ASKFGLRGLS EVLRYDLRPH
RIGVTVVCPG AVKTPLVGTA QILGVDKSHK AARKMIRRFE KHAVTPEKVA ADIIQGIEKN
RYMVITSFDI RMAWWAKRRF FFAYHLAMIV ISRFFRRMAR KAAPAALDRD AT