Gene Dole_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2812 
Symbol 
ID5695669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3392971 
End bp3394458 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content59% 
IMG OID641265426 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001530692 
Protein GI158522822 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACCG ATGCGCAAAA AGAACTGTTA ATCAAGTCCA TTGATGCGTC CCAGCGGAAG 
TTTTTTATCA TCTCTCCGGA CTATACCATT CTGGTGGCCA ACACCTTTAC CGGGCTGCTG
GTGGGAGAAC CCCTGGAGGG CAAAAAATGC TACGAGGTGT TCTGCAACCG GGATACGCCC
TGCCAGACCT GCATGGCCAG CGAGGTGCTG CGCAGCAAGC GGCCGGCCCT GTCCGGCGTG
ACCCGGGGCA CTTTTGAGAT CGCCGGCGAC GGGTCGTGCT TTTACTCCTA TCCCATTTTT
GACGGGGACC GCATTGAAGC CCTGGTGATG ATTGATTTCG ACGTTACCGT GCTGGGCGAG
ATTCGAGGCC GGCTGGAGAT GTCCAACGCC TTCTTGCGCA ACCTGATCTT AAGTTCCGTG
GACGGCGTGA TCGCCGCGGA TAAAACCGGC AAGGTGATCA TCTTCAACGA GGCCGCTTCC
GAGATCTCGG GCTACACGGT GGACGAGGCG CTAAACAGCC TGGATATTCG CAACATCTAT
CCGGGTGACG GGGCCCGTGA GATCATGCGA ATGATGCGCA GCCCGGACCA TGGCGGCGAA
GGCAAACTCA AGTCCTTTCA GGTGGACGCC CTGAGAAAGG ACGGGGGCAC GGTGCCCATC
CTGTTGAACG CTTCCATTGT GTACGAGGGG GAAAAGGAGA TCGCCTCCAT CGGGTTTTTT
CATGACATGA CCGAGGACCT GCGCATCAAG GCCGACCTTC AGAAGACCCA GACCCAGCTT
CTGCAGGCCG AAAAGATGTC CTCCCTGGGC AAGCTGGCCG CGGGCGTGGC CCACCAGCTC
AACAACCCCC TGGGTGGCAT CATGCTGTAC GCCAAGCTGC TGCTGGAGGA CTATGACCTG
AGCAGGGAGG TCACCGAGGA TATTCATCGC ATTCTGCGGG ACGCCCAGCG CAGCAGCGAC
ATCGTGCGGG AGTTGCTGGA GTTCGCCCGC CAGACCCGCC AGCAGCGGAC CATGGTGGAT
GTGAACCAGA GCGTGGCCCG TACCCTGTTT CTGCTTGAAA ACCAGACCCT GTTTCATGAC
ATCACCATTG AGAAGCGGTT TGCCGACACG GCCCTGTGGG TGGATGCGGA CGTGCAGCAG
CTCAATCACG TGTTCATGAA TATTATTCTC AACGCGGCCC AGGCCATGGA AGGCAAGGGC
GAGCTGACCA TCACCACCGG CGCGTCGGCC ATGGGCGAAA TGGTGACGGT GGAGATCGCC
GACACCGGCC CCGGTATTCC GGCCGACACC CTGCCCCGTA TCTTTGAGCC TTTTTATACG
ACCAAGGACG AGGGCAAGGG CACGGGCCTG GGCCTGAGCC TGGTTTACAG CATTATTGAT
GATCACGGCG GACGGGTGTC CGCCGCCAAC AAACCTGAAC GGGGCGCTGT TTTCAGAGTG
GAGCTGCCGG CCTATTCGGG ACAAGGAGAG GACGAGAGTG GACGATAG
 
Protein sequence
MRTDAQKELL IKSIDASQRK FFIISPDYTI LVANTFTGLL VGEPLEGKKC YEVFCNRDTP 
CQTCMASEVL RSKRPALSGV TRGTFEIAGD GSCFYSYPIF DGDRIEALVM IDFDVTVLGE
IRGRLEMSNA FLRNLILSSV DGVIAADKTG KVIIFNEAAS EISGYTVDEA LNSLDIRNIY
PGDGAREIMR MMRSPDHGGE GKLKSFQVDA LRKDGGTVPI LLNASIVYEG EKEIASIGFF
HDMTEDLRIK ADLQKTQTQL LQAEKMSSLG KLAAGVAHQL NNPLGGIMLY AKLLLEDYDL
SREVTEDIHR ILRDAQRSSD IVRELLEFAR QTRQQRTMVD VNQSVARTLF LLENQTLFHD
ITIEKRFADT ALWVDADVQQ LNHVFMNIIL NAAQAMEGKG ELTITTGASA MGEMVTVEIA
DTGPGIPADT LPRIFEPFYT TKDEGKGTGL GLSLVYSIID DHGGRVSAAN KPERGAVFRV
ELPAYSGQGE DESGR