| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2807 |
|---|
| Symbol | |
|---|
| ID | 5695664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3386458 |
|---|
| End bp | 3387858 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641265421 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001530687 |
|---|
| Protein GI | 158522817 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.75933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA CACAGAAGGA GAACATGAAA AAGCACGCCA CAATCCTGAT TGTTGATGAT
GACGCCGGCC ACCGCTCCAT GCTTCGCACT CTTCTGGAGG GGTGGGGCCA CCAGACGGCC
GAGGCCGACG ACGGCCTGGC CGCGGTGGAA TATGTTCAAA CCCGGCCCGC GGACATCGTG
CTCATGGACC TGAAGATGGT CCACATGTCC GGCATGGAGG CCTTAGAGCA GATCCGGTCT
TTTAACCCCG GAGTGCCGGT GATCATCATG ACCGCCTTCT CCTCGGTGGA CACGGCGGTG
GAGGCTCTGA AAAAAGGGGC TTACGACTAC CTGACCAAGC CCCTGGATTT TGAAAAGCTG
CGCCTTACGC TGGAGCGGAT TCTGGAGGCG GCCCGCCTGC GAAAGGAGAA CCGCCACTTA
AAGGAGCGGC TGGGCAGCCG GTTTTCCAGG GACCAGATCA TCGGAAACAG TCCGGCCATG
ACCCGGCTGC TGGAAACCGT GGAGCAGGCG GCCCCGTCCG ACGCCAGCAT CCTGATCACC
GGCGAATCCG GCACCGGCAA GGAGCTGATC GCCGGGGCCC TGCATTTCAA CAGCGCCCGC
AGGGAGGGCC CCTTTGTCAA GATCAACTGC GCCGCCATCA CCGAGACCCT GCTGGAGTCC
GAGCTGTTCG GCCATGAAAA GGGGTCCTTT ACCGGCGCGG ACAAGGCCAA GAAGGGAAGG
TTTGTCCAGG CCGACACCGG CACCATTCTG CTGGACGAAA TCGGCGAGAT GCCCCTGTCC
ATGCAGGCCA AACTGCTGCG GGTGCTTCAG GAAAAAGAGG TCACCCCCGT GGGCGGGGAA
CGCACCATTC ACGTGGACGT ACGGGTCATC GCCTCCACCA ACAAGGACCT GCATGCCCTG
GTGGAGGCCG GCACTTTTCG GGAAGACCTG TTTTTCCGGC TCAACGTGGT CAATCTGGAG
GTGCCGCCCC TGCGCAACAG AAAAGAGGAC ATTCCCGAGC TGGCCCACCA TTTTCTGACC
CTGTTTTCCG CCAAGAACAA AAAGCAGGTC CAGGGGTTTA CGCCCGACGC CATGGAGGCC
CTGCTGGCCT ATTCATGGCC GGGCAACGTG CGGGAGTTGA TGAACGCCGT GGAACGGGCC
GTGGTCCTGG CCCGGTCTGA ATACCTCTCC CGTGAGGACG TGCTGCTGAT GGCCGAGCGG
CAGGCCCCGG CCCAGGCCAC TCCGCCCCTT GCCGCGGGCG CCGGCCCGGC GTCCCATGGC
CTGCCGTTGT CGGAAGTGGA AAAGGACGCC ATCTTAAGAA CCCTGGAAGC CACGGATAAC
AACAAAAGCG AGGCCGCCCG CCGCCTGGGC ATCACGCGAA AGACATTACA GAAAAAACTG
AAACAGTACG GGGTCTCCTG A
|
|---|
| Protein sequence | MNETQKENMK KHATILIVDD DAGHRSMLRT LLEGWGHQTA EADDGLAAVE YVQTRPADIV
LMDLKMVHMS GMEALEQIRS FNPGVPVIIM TAFSSVDTAV EALKKGAYDY LTKPLDFEKL
RLTLERILEA ARLRKENRHL KERLGSRFSR DQIIGNSPAM TRLLETVEQA APSDASILIT
GESGTGKELI AGALHFNSAR REGPFVKINC AAITETLLES ELFGHEKGSF TGADKAKKGR
FVQADTGTIL LDEIGEMPLS MQAKLLRVLQ EKEVTPVGGE RTIHVDVRVI ASTNKDLHAL
VEAGTFREDL FFRLNVVNLE VPPLRNRKED IPELAHHFLT LFSAKNKKQV QGFTPDAMEA
LLAYSWPGNV RELMNAVERA VVLARSEYLS REDVLLMAER QAPAQATPPL AAGAGPASHG
LPLSEVEKDA ILRTLEATDN NKSEAARRLG ITRKTLQKKL KQYGVS
|
|---|
| |