Gene Dole_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2787 
Symbol 
ID5695644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3362047 
End bp3363204 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content63% 
IMG OID641265401 
ProductUDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 
Protein accessionYP_001530667 
Protein GI158522797 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGGC AGACCGGCTC AACAACAGGC GAGATGCGCG TCATCATTGC CGGCGGCGGC 
ACCGGGGGGC ACCTGTTTCC CGGCATCGCC ATTGCCGAGA GCTTAAAGGA GATGGCGCCC
GGGTGCCGGG TGCTGTTCGT CGGCACGGGC AGCCCCATTG AAAAGCGGGT GCTCCCAAAG
ACCGGGTTTG CCTTTGAAGT TATTGCAACC GAGGGCATCA AGGGACGGGG GCCGGTGGCC
AGAGTCAGGG CCGTGGCTAA ACTGCTGGCC GGTATTGTTG CCGCCGGCCG CCTGGTGCGG
CGTTTTGACC CGGCCGTGAT CATCGGCATG GGCGGGTACG TGTCCGCGCC GGTGGTGATA
GCGGCCCGGC TGATGGGGCG GAAAGTGGTG CTCTGCGAGC AGAACGCCCT GCCCGGCCTG
ACCAACCGGG TGCTGGCCCG GTTTGCCGAC CTGGTGTGCG TCTCCCATGA TGCCGCCGCC
GGGCGGCTGG GCGCGGCAAA AACCCTGACC ACCGGCAATC CGGTGCGAAA GGCTTTTTTG
AACGCCATGG GTGAGGCAGA AAGCGGTACC AAAAAGAACG GGCAACGGTT TACCGTTTTT
ATTGTGGGCG GCAGCCAGGG GGCCCACGGC ATCAACCTGG CCGTAACAGA GGCCTTGGAC
ATTCTGGCGG ACCGGGAGAA CATCCGGTTT GTACACCAGA CCGGCACAGC GGATTTACAG
ATGGTGAAGC AGGCCTATGA ACGGACCGGC ATCGGCCACG TGGTCCAGCC CTTTTTTGAT
GACATGGCGG CCCGGTATCT GGCCGCCGAC CTGGTGATCT GCCGGGCCGG CGCCACCACC
GTGGCGGAGA TCACCTGCAT GGGAAAGGCC TGTATTTTCG TGCCTTTTCC CGGTGCAACG
GACGACCACC AGGCCTTTAA CGCCGAGGCC CTGGTGAAAG CCGGTGCCGC GGAGATGATA
CGGCAGAAGG ACCTGAGGGG CCGGGTGCTT GCCGACCGGA TCGGGTTTTA CGCCGGTGCG
CCCGAGGCGC TTTTGGAAAT GGCGAAAAAG TCCAGGCACC TGGGAAAACC CGATGCCGGG
CGACGCGTGG CCCGGGCGTG CCTGGCCCTT GTAACGGATG GAAACAGGCA GGAAGCCGGA
GTGTTTCAAT GTATTTAA
 
Protein sequence
MNRQTGSTTG EMRVIIAGGG TGGHLFPGIA IAESLKEMAP GCRVLFVGTG SPIEKRVLPK 
TGFAFEVIAT EGIKGRGPVA RVRAVAKLLA GIVAAGRLVR RFDPAVIIGM GGYVSAPVVI
AARLMGRKVV LCEQNALPGL TNRVLARFAD LVCVSHDAAA GRLGAAKTLT TGNPVRKAFL
NAMGEAESGT KKNGQRFTVF IVGGSQGAHG INLAVTEALD ILADRENIRF VHQTGTADLQ
MVKQAYERTG IGHVVQPFFD DMAARYLAAD LVICRAGATT VAEITCMGKA CIFVPFPGAT
DDHQAFNAEA LVKAGAAEMI RQKDLRGRVL ADRIGFYAGA PEALLEMAKK SRHLGKPDAG
RRVARACLAL VTDGNRQEAG VFQCI