Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2569 |
Symbol | |
ID | 5695420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 3104519 |
End bp | 3105208 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641265177 |
Product | anaerobic ribonucleoside-triphosphate reductase activating protein |
Protein accession | YP_001530449 |
Protein GI | 158522579 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | [TIGR02495] anaerobic ribonucleoside-triphosphate reductase activating protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000247399 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATCG GCGGCCTTCA AAAAATTTCA GCCATTGATT ATCCCGGCAG GGTGGGCTGC GTGGTGTTTA CCGTGGGATG CAACTACCAC TGTCCCTACT GCCACAACCC GGACCTGGTG CGGCCAAAAG GGCCGGACTT TATGTCCGAG GCCGATTTTT TCGCCTTTCT GTCCGAGCGT ACCCATTTTT TAGACGGGGT CTCCATCACC GGCGGCGAGC CTTGCCTCCA GCCCGACCTG GCCGATTTCT GCGCGAAAAT AAAGGAAATG GGCTTTCTGG TAAAGCTGGA CACCAACGGC AGCCTGCCTG GCGTCACCGC CGGCCTGATT AAAAAGCACC TGGTGGACTA TATCGCCATG GACGTCAAAA CCGCGCCGGA GCGGTACGAG CCCCTGGCCG GGCCCGGGCT TTCGCCCGAT ACCCTTGTTC AAAGCATCGA CCTGATCAAA AATTCCGGCC TGCCGTGCGA GTTTCGCACC ACCTGTGTCC GGCCCTTTGT GGATGAGGCA GCGGTCCACC GCATCGCGGA CCTGGTGGCC GGCGCCCCGC TGTATGTGTT GCAGCATTGC GGAAAAGAGC GTATGCTCGA CCCCGAATTT TTTGATCAGG ACCCGGTGAT CGGCGCCGAA GAGATGGAGC GGTTTAAAAA TATTGCCCAA AACCGTGTGG AACGGTGTAT TATACGGTAA
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Protein sequence | MRIGGLQKIS AIDYPGRVGC VVFTVGCNYH CPYCHNPDLV RPKGPDFMSE ADFFAFLSER THFLDGVSIT GGEPCLQPDL ADFCAKIKEM GFLVKLDTNG SLPGVTAGLI KKHLVDYIAM DVKTAPERYE PLAGPGLSPD TLVQSIDLIK NSGLPCEFRT TCVRPFVDEA AVHRIADLVA GAPLYVLQHC GKERMLDPEF FDQDPVIGAE EMERFKNIAQ NRVERCIIR
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