Gene Dole_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2407 
Symbol 
ID5695255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2898358 
End bp2899773 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content56% 
IMG OID641265013 
Productradical SAM domain-containing protein 
Protein accessionYP_001530288 
Protein GI158522418 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGA TCCGCGTGTT TCTGGTAAAT GTGGGTGACC GGCCCCGGGT GTTTCAACTG 
GTGACGCCGC CGCTGGGTAT CATGTCCCTT GCCGCTTATA TACGGTCCAA GTTTTCCGCC
GAATTCTGCC TGGTCAACCA GAAGCTGCAC AACCTGTCCA ATGACGCCCT GGTGAAGATG
GCCGTGGATT TCAAGGCCGA TGTGGTGGGG CTGGGCGCCC TGACATCGGC ATCGCACAAG
ATCCCCTATA TTACGAAAAA GCTTCGGGCC CTGTTGCCCG AGGCGTTGCT CCTGCTGGGC
GGCCCCCATG TATCGGCCTT TGAGGAAAAA TCCCTGGAAG GTAACGCGGC CCATGCCGCT
GTGCCCGGTG AAGGGGAGCT GGTTTTTGAG GTGATTCTGC GCCACTGGTT TGAAGGCGAT
GGTCTGGCCG ATGTACCGGG AATTTTCTGG CGGGACAAGG ACGGCACCAT CGTTATCAAT
CCAGGGCGCA TGCCGTTCAT TCAGGATGTG GACAGCCTGC CGCCCCCGGC CTATGACCTG
ATCGACCTGC CGGCCTACTG GAAGCGCCAG TCCATGCCGC CCATTCCCCG ACGCCGGTAT
GCCTCTCTTT TTTCCAGCCG GGGATGCCCC TACAAATGCG CCTACTGCCA CCGCATTTTC
GGTGACACCT TCCGGGGCCA CTCGGCGGAC CGGATCGTGG ATGAAATCGC GTTTCTTTCG
AAAACGTACG GCATTTCAGA TTTTGAGTTT CTGGACGATA TCTTCAACCT GGACAGAAAA
CGGCTGATGA CCTTCTGTGA TCTGATTCAC AGCCGCAATC TCAAGACCCG GCTGGTCTTT
CCCAACGGGG TGCGCACCGA TATTTTTACG GCAGAAGAGA TCGAAGCCCT TGCCGACGCG
GGCATGTATT TTGCCAGTTT TGCCCTGGAG ACCGGCTCGC CCCGAATTCA GGGCCTGGTC
AGAAAAAACC TGAATATCGG CAAGTTTTTA AAAAATGTGG AGATCGCGGT CCGGTGCGGG
GTCTATGCCA ACGGATTTGC CATGATGGGA TTTCCCACGG AAACCGAAGC GGAGATGCAA
ATGACCATTG ACGTGGCCTG CGGCTCCCGC CTTCACACCA TCTCGTTTTT TACGGTCACG
CCGTTTCCCA ACACGGAACT TTACGAAATG GCCCGTCGCC AATGCCCGGA GAAGGTTGCG
GCCATTGATT ACGCTGACAT GGAATATTCC GGAATTTCTA TCAACCTGTC GGCTGTGTCG
GATGACACCC TCTATACCTA CCAGCGCAAG GCCAACCGGA CCTTCTTTTT AAACCCCCTG
CGCATGATGC GGATCGTCAG GGATTTTCCC CAGCCCCACC TGCTGCCTTT TTACCTGCCG
GTTTTTTTGA GGCGGGCTTC CAAGGGATTA CATTAA
 
Protein sequence
MKKIRVFLVN VGDRPRVFQL VTPPLGIMSL AAYIRSKFSA EFCLVNQKLH NLSNDALVKM 
AVDFKADVVG LGALTSASHK IPYITKKLRA LLPEALLLLG GPHVSAFEEK SLEGNAAHAA
VPGEGELVFE VILRHWFEGD GLADVPGIFW RDKDGTIVIN PGRMPFIQDV DSLPPPAYDL
IDLPAYWKRQ SMPPIPRRRY ASLFSSRGCP YKCAYCHRIF GDTFRGHSAD RIVDEIAFLS
KTYGISDFEF LDDIFNLDRK RLMTFCDLIH SRNLKTRLVF PNGVRTDIFT AEEIEALADA
GMYFASFALE TGSPRIQGLV RKNLNIGKFL KNVEIAVRCG VYANGFAMMG FPTETEAEMQ
MTIDVACGSR LHTISFFTVT PFPNTELYEM ARRQCPEKVA AIDYADMEYS GISINLSAVS
DDTLYTYQRK ANRTFFLNPL RMMRIVRDFP QPHLLPFYLP VFLRRASKGL H