| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2380 |
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| Symbol | |
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| ID | 5695228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2867502 |
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| End bp | 2868734 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641264986 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001530261 |
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| Protein GI | 158522391 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACAGG GATCACATAA AGCCATTGCC GGCGCTTCCA GGCGCGACCC CCTGGAGGCG
GAAATCGAAA AGAGTCTTCT TCAACAAGGC GGCCTGCGAT TTTCCCCGGT TATGGAGCGA
AAGTACATTC ATGATACCAT TGAGCACCGG TTCGGCACTT ACCGCGTTTT GTTCTGGTTT
GCCGTTTTTC TGTTCAACCT GTTTGCCATC TCTGATTATG TCCTGACGCC GGACATCTAT
CCCGTGGCCT GGTTTTTCCG GTTCGCCCTG GCCACGCCGG TGATGATCGC GGCCATGGCC
CTGGCCTCCC GGCAGCGGTT CCGCCGGTAT ATTATTCACC TGCTCACCCT GCTGTTTTTC
ATGGGCGGGG CCAGCCTGCT GCTGCTGGCG GTACTGAGCA GCGCGCCCAA CGCGGGCCAC
TCCTACACCG GCGTGGCCCT GGTCATCCTG TTTGCCGCCA TTGTGATCCG CATTCCCTTC
TGGCATGCCG TTGCCCTGTG TGGCGGTCTG TTCCTGCTTC ATCTTCTGAT TTTCCCCTGG
TTTCAAATGC CGACGGACCT GATTGTTCAC TCGGCCCTGG TCGTGTTTTC CGTGGCGGTT
ATCTCCCTGC TGGGAAACTA TCGGATAGAG CGGGAGTTTC GCAGGGCATA CCTGCGGGCA
TTGAAGATGA AGATCGATGC CCGGCAACTG GAAGGGCTCA ACCGGCAACT GGAAGAGATG
GCGGTTTCCG ATCCCTTGAC CGGGCTGTTC AACCGCCGCC ATTTTGACGC CCACCTGGAT
GCCGAGTGGC GCAGCGCGGT CCGCGAACAG TTGTCGATTT CCCTTATTTT TATCGATATC
GACCACTTCA AGTTGTACAA CGACAACCAT GGACACCAGG CCGGCGACCT CTGCCTCAAG
CAGATTGCCG ATACCCTTAC CGAAAACGTC CATCGGCCGG GGGACGCCTG TGTCCGGTAC
GGCGGGGAGG AGTTCGTGGT GCTGCTGGCC AACACCAACA TGGACCAGGC CCTGTACGTG
GCGCAAAAAA TTCAGTCCCA CCTTCAGGCC CTGGCCATTC CCCACGGATA TTCACCGGTG
GCCGGCGAGG TGACGGTGAG TATGGGGGTG GCTTCCATGG TGCCGGACCG TGATGATACG
CCGGAGGACC TGCTGGAAAA GGCCGATAAA TCACTGTACC GTGCCAAGGA CGCGGGCCGA
AACCGGATAT GCGTGGACGG CCTGCCGTGC TAA
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| Protein sequence | MIQGSHKAIA GASRRDPLEA EIEKSLLQQG GLRFSPVMER KYIHDTIEHR FGTYRVLFWF
AVFLFNLFAI SDYVLTPDIY PVAWFFRFAL ATPVMIAAMA LASRQRFRRY IIHLLTLLFF
MGGASLLLLA VLSSAPNAGH SYTGVALVIL FAAIVIRIPF WHAVALCGGL FLLHLLIFPW
FQMPTDLIVH SALVVFSVAV ISLLGNYRIE REFRRAYLRA LKMKIDARQL EGLNRQLEEM
AVSDPLTGLF NRRHFDAHLD AEWRSAVREQ LSISLIFIDI DHFKLYNDNH GHQAGDLCLK
QIADTLTENV HRPGDACVRY GGEEFVVLLA NTNMDQALYV AQKIQSHLQA LAIPHGYSPV
AGEVTVSMGV ASMVPDRDDT PEDLLEKADK SLYRAKDAGR NRICVDGLPC
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