Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2348 |
Symbol | |
ID | 5695196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 2830942 |
End bp | 2833110 |
Gene Length | 2169 bp |
Protein Length | 722 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264954 |
Product | RecD/TraA family helicase |
Protein accession | YP_001530229 |
Protein GI | 158522359 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCA CATTGACAGG CCAGCTGGAG CGCATCACCT ACACCAGCGA GGAGAGCGGG TTTACCGTGG CCCGGGTCAG GGTGCGGGGC CAACAAGACC CGGTTACCGT GGTGGGGCCG TTGCTGGGGG TGTCACCGGG TGAGGTCCTT GAAATGCAGG GCCAGTGGAC CACCCACCCC TCCTTTGGTG ACCAGTTCAA GGTGGAATCT TACAAAGCCC GGGCCCCGGT CACGGTGGAG GGCATTCAGA AATACCTTGC CTCAGGCATG ATCAAGGGCA TCGGCCCGGT CACGGCCGAG CGCATCACAA AAAAGTTCGG TAAAAAGACC CTTCAGGTCC TGGAGACCGA CATCAGCCGC CTGGCCAAAG TGCCGGGCAT CGGCAAGAAA CGCATCACCA TGATTCAGGC GTCCTGGGAG GCCCACAAAG AAGTCCGGGA CGTGATGGTC TTTTTGCAGA GCCAGGGCAT CGGCTCCGGC TACGCCATGC GCATTTTTCA GACGTATGGC ACCGGCACCA TGGACGTGGT GACGAACAAC CCCTACCGGC TGGCCGCTGA CGTGGCCGGC ATCGGGTTTC TCATCGCCGA CCGCATCGCT GAAAAACTGG GGTTTGCCAA AAATTCACCG GTGCGGGTGC GGGCAGGGGT GCTGCATGTG CTTTCCAGCC TGGGCGATGA CGGCCATGTC TATTACCCCT TTGAGCCGCT GGTCCGAAAG AGCATGGAGA TCCTGGGCGT GGACCGGGCA CTGGTGGTGG CTGCCGTTGC CGACGAGGCA ACGGAAAAAA ATATCGTGGT CGAGGAGTTG AAGGATGACG ACGGCGAGGA CGGCAAGGGG GTTTACCTGG CCGGCTATTT TCTGTGCGAA ACCGGCATCG CCCGCCGGAT AAAAGAGCAG GTGGCCACCG GCAAGGTGAT TCGGGAGATC GACACGGCCA GGGCCGTGGA CTGGGTGCAG AAAAAGCTTT CCATCACCCT GGCCGAGAAG CAGGCCGAGG CGGTGCGCAC CGCGGCCAAA AGCAAGCTCA TGGTGATCAC CGGCGGGCCG GGTACGGGCA AGACCACCAT CGTAAAGTCC GTGCTGCACA TCATCAACGC CCTGGGGGCC GTGGTGCTGC TGGCCGCGCC CACGGGCCGG GCCGCCAAGA AACTCAAGGA GGCCACCGGC CACGAGGCCC GCACCATTCA CCGCCTGCTG GAGTTTTCCA TGGCCAAGGG CGGGTTCCAG CGCCACGACA GCCGGCCCCT GGAGTGCGAT CTTTTGGTGA TCGACGAGGC CTCCATGATC GACACGGTGC TGATGTACCA CCTGCTCAAG GCGGTGCCGC CCCATGCCGT GCTGATCCTT GTGGGGGACG TGAACCAGTT GCCGTCGGTG GGGCCGGGCA ACGTGTTAAA CGATATTATC TCCTCGGGCG TGGCGCCGGT GGTGACGTTA AACGAGATTT TCCGCCAGGC CAGGCAGAGC CGGATCGTGG TCAACGCCCA TCTGATCAAC CAGGGACAAC TGCCCCATAT TCAGAACGAC GATACAGCCG GCGACTTTTT CTTTGTGGAC CAGGAAGACC CGGACACGGT TGCCGACACC ATTGTCGACC TGGTCACCCG CCGCATTCCG GCAAAGTTTG ACCTTGATCC CTTTGACGAC ATTCAGGTGC TGACCCCCAT GCACAAGGGA ACGGTGGGCG CCATCAACCT GAATAACCGG CTGCAGAAGG CGTTAAACCC GGAGTCAAAG GGCATTGTCC GGGGCGAGGC CACCTTCGGC CTGTCGGACA AGGTGATGCA GATTCGCAAC AACTATGACA AGGAAGTGTT CAACGGCGAC ATCGGCCGCA TTGTCCGTAT CAATCAGGAG GCCCGGGTGC TGGGCGTTCT GTTTGACGGG CGGGAGGTGG CTTACGATTT TTCAGAGTTA GACGAGCTGG TGCTGGCCTA TGCCATTTCC GTGCACAAGT CCCAGGGATC GGAGTATCCG GCGGTGGTGA TGCCTGTTCT GACCCAGCAC TACATCCTGT TGCAGCGCAA CCTGGTGTAC ACGGCCGTGA CCCGGGGCCG CCGCCTGGTG GTGATGGTGG GCACCAAAAA GGCCCTGGCC ATCAGCGTGA ACAACAACCG GCCCAACCTG CGCTACACGC GGCTGCGCCA GCGGCTGGCC GGTGCATAA
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Protein sequence | METTLTGQLE RITYTSEESG FTVARVRVRG QQDPVTVVGP LLGVSPGEVL EMQGQWTTHP SFGDQFKVES YKARAPVTVE GIQKYLASGM IKGIGPVTAE RITKKFGKKT LQVLETDISR LAKVPGIGKK RITMIQASWE AHKEVRDVMV FLQSQGIGSG YAMRIFQTYG TGTMDVVTNN PYRLAADVAG IGFLIADRIA EKLGFAKNSP VRVRAGVLHV LSSLGDDGHV YYPFEPLVRK SMEILGVDRA LVVAAVADEA TEKNIVVEEL KDDDGEDGKG VYLAGYFLCE TGIARRIKEQ VATGKVIREI DTARAVDWVQ KKLSITLAEK QAEAVRTAAK SKLMVITGGP GTGKTTIVKS VLHIINALGA VVLLAAPTGR AAKKLKEATG HEARTIHRLL EFSMAKGGFQ RHDSRPLECD LLVIDEASMI DTVLMYHLLK AVPPHAVLIL VGDVNQLPSV GPGNVLNDII SSGVAPVVTL NEIFRQARQS RIVVNAHLIN QGQLPHIQND DTAGDFFFVD QEDPDTVADT IVDLVTRRIP AKFDLDPFDD IQVLTPMHKG TVGAINLNNR LQKALNPESK GIVRGEATFG LSDKVMQIRN NYDKEVFNGD IGRIVRINQE ARVLGVLFDG REVAYDFSEL DELVLAYAIS VHKSQGSEYP AVVMPVLTQH YILLQRNLVY TAVTRGRRLV VMVGTKKALA ISVNNNRPNL RYTRLRQRLA GA
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