| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2310 |
|---|
| Symbol | |
|---|
| ID | 5695158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2795568 |
|---|
| End bp | 2796899 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264916 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_001530191 |
|---|
| Protein GI | 158522321 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0985246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGA ACCTGAGCGA CAAGCTGAAT TCGGTTTTTA AGAAGCTTAA AGGCCAGGGA
ACGCTTACCG AGAAGAATAT CGACGATGGC CTCAAGGAGG TGCGGTTTGC CCTGCTGGAG
GCCGACGTCC ACTACCGGAT CGTCAAGCAG TTTATCGCCG ACATTCGGGA ACGGGCCGTG
GGCGCCGATG TGCTGGAGAG CCTGACCCCG GGTCAGCAGG TCATCAAGAT CGTTTACGAA
GAGCTGACCC GGCTGATGGG GGAAACGCGG CAGGACCTGA ACCTGACCGG CCAGGCCCCG
GTGTCGGTGA TGCTGGTGGG GCTTCAGGGC TCCGGTAAAA CCACCACCGC CGCCAAGCTG
GCCGTTTATC TGAAAAAGCA GGGCAGAAAG CCCTTTCTGG TGCCGGCGGA CGTTTACCGG
CCCGCGGCCA TCGACCAGCT CAAAAAGCTG GGCAGCCAGG TCCAGGTGCC GGTGTTTGCG
TCGGATCCCG GCATGAACCC GGTGGATATC TGCCGCCAGG CCCGGGTGGC GGCCCAGCAG
CAGGGGTGCA ACACGCTGCT TCTGGACACG GCGGGCCGGC TTCACATCGA CGAAGCGTTG
ATGGAGGAGC TGGTCGGCAT CAAGCAGGCC GTGTCGCCGT CGGACATTCT GCTGGTGGCC
GATGCCATGA CCGGCCAGGA CGCAGTCAAC ATCGCCCAGT CCTTTAACGA ACGGCTGGAC
ATCGGCGGCG TGATCCTGTC CAAGATGGAC GGCGACGCCA GGGGCGGCGC GGCGCTTTCC
ATCAAGGCGG TGACCGGCAG GCCCATCAAG TTCGTGGGCG TGGGCGAAAA GACAAACGCC
CTGGAGGCGT TTCACCCGGA CCGCATGGCC TCCAGCATTC TGGGCATGGG CGATGTGCTT
TCGTTCATCG AAAAGGCCCA GTCCGTTGTG GACGAGAAAA AGGCGGCGGA CCTTGAGCGA
AAGCTGCGGA AAAACGAGTT TACCCTGGAG GATTTTCGGG ACCAGATGAC CCAGATTCGC
AAGATGGGCT CCATCGGCGA TCTGATGAAG ATGATTCCAG GCATGGGCAA GGTCAAACAG
ATGAAGGACA TGGAGGTGGA TGACGGGCAG CTCTCCCGCA TCGAAGCCAT CATCAACTCC
ATGACAGCGG AGGAACGGCG GCGGCATGCC ATCATCAACG GCAGCCGGCG GAAAAGAATA
GCAAAGGGCA GCGGCACCAG CGTGCAGGAG GTCAACCGGC TGTTGAAGGA CTACACGCAG
GTGATGAAAA TGGTAAAAAA AATCAACAAG GGCGGCATGC GCGGTCTGGG CCGCGGCATG
ATGCCGTTCT AA
|
|---|
| Protein sequence | MFENLSDKLN SVFKKLKGQG TLTEKNIDDG LKEVRFALLE ADVHYRIVKQ FIADIRERAV
GADVLESLTP GQQVIKIVYE ELTRLMGETR QDLNLTGQAP VSVMLVGLQG SGKTTTAAKL
AVYLKKQGRK PFLVPADVYR PAAIDQLKKL GSQVQVPVFA SDPGMNPVDI CRQARVAAQQ
QGCNTLLLDT AGRLHIDEAL MEELVGIKQA VSPSDILLVA DAMTGQDAVN IAQSFNERLD
IGGVILSKMD GDARGGAALS IKAVTGRPIK FVGVGEKTNA LEAFHPDRMA SSILGMGDVL
SFIEKAQSVV DEKKAADLER KLRKNEFTLE DFRDQMTQIR KMGSIGDLMK MIPGMGKVKQ
MKDMEVDDGQ LSRIEAIINS MTAEERRRHA IINGSRRKRI AKGSGTSVQE VNRLLKDYTQ
VMKMVKKINK GGMRGLGRGM MPF
|
|---|
| |