| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2306 |
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| Symbol | trmD |
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| ID | 5695154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2793276 |
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| End bp | 2794115 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264912 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001530187 |
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| Protein GI | 158522317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000870847 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGA AATTTTTTAG CCCTGCCACA GGCGGGGCTT GCGGCATATT CGAACCGGCC
CGAAAGGCCG GACAAAAAAG GCGTGCCATG AACTTTACGG TGTTGACGAT TTTCCCGGAG
ATGGTGGATG CCTTTTCCCA GCATGGCATT GTCCGGCGGG CCGTAGAAAG CGGCACCATC
TCGTGCCGGA CCGTTGACAT TCGCGACTAT ACAAAAGATC GTCACCGGAC CGTGGATGAT
CGGCCTTACG GCGGGGGCAG CGGCATGGTG ATGAAGCCCG AGCCCCTGGC AGCGGCCATT
CGGGATGCCA GAAACGCCTA TCCGTCGGCC CGTACAGTGC TCTTGACCCC CCAGGGCCGG
GGGTTTACCC AGGAGGCGGC CCGGCACCTG GCCGATGCCG CCGAAGACCT GATTCTGGTG
TGCGGCCGTT ACGAAGGCAT TGACGAGCGG GTCTGCCAGG GACTGATTGA CGATGAGATT
TCCGTGGGCG ATTACGTGCT TTCCGGCGGC GAGGTGCCGG CCATGATCGT CATCGACGCG
GTCACCCGAC TGATTCCCGG TGCCCTGGGC GGCGAGGACT CGGCGGAAAA GGAGACCTTT
GTGCAGGGAC GGATCGAGCA CGCCCACTAC ACCCGGCCCC CGGTATTTGA AGGGGAACCG
GTGCCCGAAG TCCTGGTTTC CGGCAACCAC GCCCGGATCG AAGCCTGGCG ACTGGAAACC
TCCCTGGTTC GCACCCTGCT CAAGCGGCCG GACCTGCTGC TGGAAAGAGC GTTGACCCCG
GAGGAGAAAA AGGCGCTCAA AGCGTGGTGC CGGAAGGTTG AAACCCTTGT CGCCGATTAG
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| Protein sequence | MKLKFFSPAT GGACGIFEPA RKAGQKRRAM NFTVLTIFPE MVDAFSQHGI VRRAVESGTI
SCRTVDIRDY TKDRHRTVDD RPYGGGSGMV MKPEPLAAAI RDARNAYPSA RTVLLTPQGR
GFTQEAARHL ADAAEDLILV CGRYEGIDER VCQGLIDDEI SVGDYVLSGG EVPAMIVIDA
VTRLIPGALG GEDSAEKETF VQGRIEHAHY TRPPVFEGEP VPEVLVSGNH ARIEAWRLET
SLVRTLLKRP DLLLERALTP EEKKALKAWC RKVETLVAD
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